RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 RUBCNLQ9H714 662 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 TINAGQ9UJW2 476 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF835Q9Y2P0 537 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 A8MT66 165 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 TMPRSS11DO60235 418 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 HS6ST1O60243 411 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 CDC40O60508 579 aaKnown RBP eCLIP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 PRKRAO75569 313 aaKnown RBP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 WISP2O76076 250 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 SUPT7LO94864 414 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 GBAP04062 536 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 P04436 131 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 KLK1P06870 262 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 RPS17P08708 135 aaKnown RBP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 PIK3R1P27986 724 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 HERVK_113P63132 956 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 ASPHQ12797 758 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 TRAF3Q13114 568 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 SLC29A2Q14542 456 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 MPEG1Q2M385 716 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 GGTA1PQ4G0N0 100 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 RNFT1Q5M7Z0 435 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 C6orf163Q5TEZ5 329 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 MRM1Q6IN84 353 aaKnown RBP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 XKRXQ6PP77 449 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 Q6ZPB1 254 aaPredicted RBP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 RGS9BPQ6ZS82 235 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 GK5Q6ZS86 529 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 ZFP62Q8NB50 900 aaPredicted RBP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 GOLM1Q8NBJ4 401 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 MYRIPQ8NFW9 859 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 C16orf52Q8NHV5 167 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 NUBPLQ8TB37 319 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF483Q8TF39 744 aaPredicted RBP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 SELENOMQ8WWX9 145 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 ERVK-6Q9BXR3 956 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF717Q9BY31 904 aaPredicted RBP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 ZBTB26Q9HCK0 441 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 RYDENQ9NUL5 291 aaKnown RBP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 PSMC3IPQ9P2W1 217 aaPredicted RBP12.74□□□□□ -0.37
CXCL12-205ENST00000395794 FETUBQ9UGM5 382 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 ADAM29Q9UKF5 820 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 SLC12A4Q9UP95 1085 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 DOPEY1Q5JWR5 2465 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 HIVEP3Q5T1R4 2406 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 POLEQ07864 2286 aa12.74□□□□□ -0.37
CXCL12-205ENST00000395794 SPTBN1Q01082 2364 aaKnown RBP12.73□□□□□ -0.37
CXCL12-205ENST00000395794 AIFM1O95831 613 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 KRT6AP02538 564 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 KRT6BP04259 564 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 SLC35E2P0CK97 266 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 HOXB1P14653 301 aaPredicted RBP12.73□□□□□ -0.37
CXCL12-205ENST00000395794 TSPAN8P19075 237 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 CNR1P21554 472 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 GALNSP34059 522 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 PTGER1P34995 402 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 PTGS2P35354 604 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 KRT6CP48668 564 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 MAPK12P53778 367 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 CDH13P55290 713 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 PPIAP62937 165 aaKnown RBP12.73□□□□□ -0.37
CXCL12-205ENST00000395794 ERVK-8P63133 956 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 HSF1Q00613 529 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 CLCQ05315 142 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 TBL3Q12788 808 aaKnown RBP12.73□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF267Q14586 743 aaPredicted RBP12.73□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF750Q32MQ0 723 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 PIGGQ5H8A4 983 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 SP5Q6BEB4 398 aaPredicted RBP12.73□□□□□ -0.37
CXCL12-205ENST00000395794 RNF111Q6ZNA4 994 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 FAM47EQ6ZV65 393 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 SLC22A16Q86VW1 577 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 SLC22A9Q8IVM8 553 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 SLC15A4Q8N697 577 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 OR2M7Q8NG81 312 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 OR4K14Q8NGD5 310 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 ACMSDQ8TDX5 336 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 TRPC4APQ8TEL6 797 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 ITLN2Q8WWU7 325 aaPredicted RBP12.73□□□□□ -0.37
CXCL12-205ENST00000395794 GAL3ST4Q96RP7 486 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 FAM173AQ9BQD7 235 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 C1QTNF3Q9BXJ4 246 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 MRPL1Q9BYD6 325 aaKnown RBP12.73□□□□□ -0.37
CXCL12-205ENST00000395794 BRF2Q9HAW0 419 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 SACM1LQ9NTJ5 587 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 TRPS1Q9UHF7 1281 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 DCDC2Q9UHG0 476 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 ERVK-19Q9WJR5 959 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 ENTPD4Q9Y227 616 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 STK38LQ9Y2H1 464 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 MEMO1Q9Y316 297 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 KLF2Q9Y5W3 355 aaPredicted RBP12.73□□□□□ -0.37
CXCL12-205ENST00000395794 ICE1Q9Y2F5 2266 aa12.73□□□□□ -0.37
CXCL12-205ENST00000395794 A0A1B0GTH9 108 aa12.72□□□□□ -0.37
CXCL12-205ENST00000395794 CCDC151A5D8V7 595 aa12.72□□□□□ -0.37
CXCL12-205ENST00000395794 OR6C76A6NM76 312 aa12.72□□□□□ -0.37
CXCL12-205ENST00000395794 GOLGA8RI6L899 631 aa12.72□□□□□ -0.37
CXCL12-205ENST00000395794 HNRNPRO43390 633 aaKnown RBP12.72□□□□□ -0.37
CXCL12-205ENST00000395794 IGKV3-11P04433 115 aa12.72□□□□□ -0.37
CXCL12-205ENST00000395794 GSTA1P08263 222 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms