RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CRYBA2P53672 197 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 ILKQ13418 452 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCAF11-204ENST00000395454 MRM1Q6IN84 353 aaKnown RBP14.29□□□□□ -0.12
SCAF11-204ENST00000395454 EIF3MQ7L2H7 374 aaKnown RBP14.29□□□□□ -0.12
SCAF11-204ENST00000395454 TMPRSS9Q7Z410 1059 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 ADCK2Q7Z695 626 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 PLD3Q8IV08 490 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 SVOPLQ8N434 492 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 OR2L5Q8NG80 312 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 OR5P2Q8WZ92 322 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 TMBIM1Q969X1 311 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 RDH12Q96NR8 316 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 MAP3K3Q99759 626 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 SLC35A5Q9BS91 424 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 RAB33BQ9H082 229 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 KLHL25Q9H0H3 589 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 RAD21L1Q9H4I0 556 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 NEUROD4Q9HD90 331 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 PRM3Q9NNZ6 103 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 C1GALT1Q9NS00 363 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 ACSS1Q9NUB1 689 aaPredicted RBP14.29□□□□□ -0.12
SCAF11-204ENST00000395454 ANKMY1Q9P2S6 941 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 EPHA6Q9UF33 1036 aa14.29□□□□□ -0.12
SCAF11-204ENST00000395454 OR2A25A4D2G3 310 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 DPPA5A6NC42 116 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 DPM1O60762 260 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 SIM1P81133 766 aaPredicted RBP14.28□□□□□ -0.12
SCAF11-204ENST00000395454 EEF1A2Q05639 463 aaKnown RBP14.28□□□□□ -0.12
SCAF11-204ENST00000395454 MYBPC3Q14896 1274 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 C16orf72Q14CZ0 275 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 RSPO4Q2I0M5 234 aaPredicted RBP14.28□□□□□ -0.12
SCAF11-204ENST00000395454 SLC36A3Q495N2 470 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 TMEM71Q6P5X7 295 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 ABHD17CQ6PCB6 329 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 ZNF793Q6ZN11 406 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 PIWIL3Q7Z3Z3 882 aaKnown RBP14.28□□□□□ -0.12
SCAF11-204ENST00000395454 MMP21Q8N119 569 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 C11orf65Q8NCR3 313 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 KCNC2Q96PR1 638 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 ADI1Q9BV57 179 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 SYNPO2LQ9H987 977 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 IL1RAPQ9NPH3 570 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 SLAMF7Q9NQ25 335 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 PRDM7Q9NQW5 492 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 SMPD3Q9NY59 655 aaPredicted RBP14.28□□□□□ -0.12
SCAF11-204ENST00000395454 USE1Q9NZ43 259 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 KLHL20Q9Y2M5 609 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 PCDHGB5Q9Y5G0 923 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 PCDHGA1Q9Y5H4 931 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 ASPMQ8IZT6 3477 aa14.28□□□□□ -0.12
SCAF11-204ENST00000395454 MN1Q10571 1320 aaPredicted RBP14.28□□□□□ -0.12
SCAF11-204ENST00000395454 RNF103-CHMP3A0A140T963 221 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 TLCD2A6NGC4 264 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 A8MU76 341 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 D6RAR5 112 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 NTN3O00634 580 aaPredicted RBP14.27□□□□□ -0.12
SCAF11-204ENST00000395454 TNFAIP8O95379 198 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 ALPLP05186 524 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 NUDT7P0C024 238 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 CEACAM1P13688 526 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 MAGP20916 626 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 UQCRC2P22695 453 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 ALDH3A2P51648 485 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 ARSFP54793 590 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 RPS15AP62244 130 aaKnown RBP14.27□□□□□ -0.12
SCAF11-204ENST00000395454 MYBPC1Q00872 1141 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.27□□□□□ -0.12
SCAF11-204ENST00000395454 TRIM40Q6P9F5 258 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 CCDC80Q76M96 950 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 SRFBP1Q8NEF9 429 aaKnown RBP14.27□□□□□ -0.12
SCAF11-204ENST00000395454 NT5CQ8TCD5 201 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 PNPT1Q8TCS8 783 aaKnown RBP14.27□□□□□ -0.12
SCAF11-204ENST00000395454 VPS50Q96JG6 964 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 CNBD2Q96M20 576 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 DPH2Q9BQC3 489 aaPredicted RBP14.27□□□□□ -0.12
SCAF11-204ENST00000395454 TEX10Q9NXF1 929 aaPredicted RBP14.27□□□□□ -0.12
SCAF11-204ENST00000395454 UTS2RQ9UKP6 389 aa14.27□□□□□ -0.12
SCAF11-204ENST00000395454 A0A0J9YY10 115 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 EIF4E1BA6NMX2 242 aaKnown RBP14.27□□□□□ -0.13
SCAF11-204ENST00000395454 TMEM229AB2RXF0 380 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 C4orf51C9J302 202 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 PDPK1O15530 556 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 GCM2O75603 506 aaPredicted RBP14.27□□□□□ -0.13
SCAF11-204ENST00000395454 KRT75O95678 551 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 FAM58BPP0C7Q3 252 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 FTH1P19P0C7X4 201 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 SMIM18P0DKX4 95 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 PVRP15151 417 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 ZNF23P17027 643 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 HIST1H1TP22492 207 aaPredicted RBP14.27□□□□□ -0.13
SCAF11-204ENST00000395454 MYF6P23409 242 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 LSSP48449 732 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 E2F1Q01094 437 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 MERTKQ12866 999 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 SQSTM1Q13501 440 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 GK3PQ14409 553 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 SLC5A12Q1EHB4 618 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 SAXO2Q658L1 398 aa14.27□□□□□ -0.13
SCAF11-204ENST00000395454 DHRS13Q6UX07 377 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms