RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SFRP4Q6FHJ7 346 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 LAMTOR1Q6IAA8 161 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 MRNIPQ6NTE8 343 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 C1orf94Q6P1W5 598 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 USP53Q70EK8 1073 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 GPSM1Q86YR5 675 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 OR4C6Q8NH72 309 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PHOSPHO1Q8TCT1 267 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 REPS1Q96D71 796 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 POM121Q96HA1 1249 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 GPR20Q99678 358 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PINK1Q9BXM7 581 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PRKD2Q9BZL6 878 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 SEMA4CQ9C0C4 833 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 ABCC13Q9NSE7 274 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 SLAMF8Q9P0V8 285 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 LAMP5Q9UJQ1 280 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 AGO1Q9UL18 857 aaKnown RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 COL4A1P02462 1669 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 LTBP3Q9NS15 1303 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 C17orf102A2RUQ5 167 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 ADH1AP07327 375 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 ALDOCP09972 364 aaKnown RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 BTF3P20290 206 aaKnown RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 CCR6P51684 374 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 CRHR2Q13324 411 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM44Q2T9K0 475 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 LGALSLQ3ZCW2 172 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 ADAM5Q6NVV9 412 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 METAP1DQ6UB28 335 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 TIPARPQ7Z3E1 657 aaKnown RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 KRT77Q7Z794 578 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 CBLN2Q8IUK8 224 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PHACTR4Q8IZ21 702 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 LGI4Q8N135 537 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 HDDC3Q8N4P3 179 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 B3GNT7Q8NFL0 401 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 OR8J3Q8NGG0 315 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 NEIL3Q8TAT5 605 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 UCN3Q969E3 161 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 HSPA12BQ96MM6 686 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 LMAN2LQ9H0V9 348 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 MAGIXQ9H6Y5 334 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 SLC6A20Q9NP91 592 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 NMRK2Q9NPI5 230 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 COA4Q9NYJ1 87 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 TAS2R16Q9NYV7 291 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 DNAJC15Q9Y5T4 150 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PAPPAQ13219 1627 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 A0A0G2JLL6 359 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM72A0PK05 275 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF670-ZNF695F2Z2N8 137 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 TXNDC12O95881 172 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 TCRBP04435 133 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 HLA-DPB1P04440 258 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 C6P13671 934 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 SELLP14151 372 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 HRH2P25021 359 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 ARSDP51689 593 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 GEMP55040 296 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 ATXN7L3Q14CW9 347 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 CXCL17Q6UXB2 119 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 SLC29A4Q7RTT9 530 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PRRT2Q7Z6L0 340 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 XYLT1Q86Y38 959 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PYROXD2Q8N2H3 581 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 GTPBP8Q8N3Z3 284 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 RELL2Q8NC24 303 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 SPATA22Q8NHS9 363 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 OLIG1Q8TAK6 271 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 TM9SF4Q92544 642 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 C18orf25Q96B23 403 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 UPRTQ96BW1 309 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 LRFN5Q96NI6 719 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 GAL3ST4Q96RP7 486 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 MARVELD1Q9BSK0 173 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 OR10A4Q9H209 315 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 RHBGQ9H310 441 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PIGMQ9H3S5 423 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PDZD7Q9H5P4 517 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 DNAJC27Q9NZQ0 273 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 GNG8Q9UK08 70 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 IQCMA0A1B0GVH7 501 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 LOC285095A0A1B0GVY8 99 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TRAPPC13A5PLN9 417 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CARNS1A5YM72 827 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 FAM86C2PA6NEL3 165 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 M0R082 166 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 EDIL3O43854 480 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 FADS1O60427 444 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 GPX5O75715 221 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 KLK3P07288 261 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 UROSP10746 265 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ACPPP15309 386 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 NME1P15531 152 aaKnown RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 HNF1AP20823 631 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 MATKP42679 507 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 DGKEP52429 567 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TAS2R60P59551 318 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 OLIG2Q13516 323 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms