RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 SLC18A1P54219 525 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 NKX3-2P78367 333 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 OR2AP1Q8NGE2 309 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 OR9A2Q8NGT5 310 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 ARNTL2Q8WYA1 636 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 KLK6Q92876 244 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 ITPKCQ96DU7 683 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 SLC32A1Q9H598 525 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 UTS2RQ9UKP6 389 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 POMPQ9Y244 141 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 PCDHGA6Q9Y5G7 932 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 LOC102723532A0A0G2JNH3 316 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 H7C1Q1 480 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 K7EQM0 130 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 KHNYNO15037 678 aaKnown RBP14.18□□□□□ -0.14
CCDC50-201ENST00000392455 CASC3O15234 703 aaKnown RBP14.18□□□□□ -0.14
CCDC50-201ENST00000392455 C4BPAP04003 597 aaKnown RBP14.18□□□□□ -0.14
CCDC50-201ENST00000392455 HEXBP07686 556 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 RHOP08100 348 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 FKBP1BP68106 108 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 PRSS58Q8IYP2 241 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 PCED1BQ96HM7 432 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 TGFB1I1O43294 461 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 NOBOXO60393 691 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 OAS1P00973 400 aaKnown RBP14.18□□□□□ -0.14
CCDC50-201ENST00000392455 HBE1P02100 147 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 PRAMEF14Q5SWL7 426 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 BCL2L15Q5TBC7 163 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 CEACAM20Q6UY09 585 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 HSPE1-MOB4S4R3N1 261 aa14.18□□□□□ -0.14
CCDC50-201ENST00000392455 CCL22O00626 93 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 NDUFS4O43181 175 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 GPR37L1O60883 481 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SLURP2P0DP57 97 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 CD34P28906 385 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 RABGGTBP53611 331 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 MS4A15Q8N5U1 240 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 KCT2Q8NC54 265 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 NUS1Q96E22 293 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 TRAV6A0A075B6T7 132 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SLC22A31A6NKX4 558 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SAP18O00422 153 aaKnown RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 HOXA10P31260 410 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 RFC3P40938 356 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 UBE2G2P60604 165 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 ITPRIPL2Q3MIP1 535 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 C6orf141Q5SZD1 244 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 TNFAIP8L2Q6P589 184 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 IL17RCQ8NAC3 791 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 OR4K1Q8NGD4 311 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SPRYD4Q8WW59 207 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SLC2A4RGQ9NR83 387 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 PCDHGC4Q9Y5F7 938 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 TMEM131LA2VDJ0 1609 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 MT-ND1P03886 318 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 RAB8AP61006 207 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 CAP1Q01518 475 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 HMGCS1Q01581 520 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 TLE4Q04727 773 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SLC27A4Q6P1M0 643 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 AMDHD1Q96NU7 426 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 KCNC2Q96PR1 638 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 B3GNT2Q9NY97 397 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 WDPCPO95876 746 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 CCNOP22674 350 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 MMP8P22894 467 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 FRG2Q64ET8 278 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 PLD5Q8N7P1 536 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF610Q8N9Z0 462 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 OR1J4Q8NGS1 313 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 FRG2BQ96QU4 278 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 IKZF4Q9H2S9 585 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 KLRG2A4D1S0 409 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 P2RX6O15547 441 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 PTTG1O95997 202 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SLC18A2Q05940 514 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 LRRC32Q14392 662 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 ARHGAP19Q14CB8 494 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 CATSPEREQ5SY80 951 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 ARHGAP40Q5TG30 622 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 HACD4Q5VWC8 232 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 TMEM214Q6NUQ4 689 aaKnown RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 NOXA1Q86UR1 476 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 LRRTM4Q86VH4 590 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 PYROXD2Q8N2H3 581 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 FAM110BQ8TC76 370 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 RPL10LQ96L21 214 aaKnown RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 MTMR11A4FU01 709 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 WNT9AO14904 365 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 CST3P01034 146 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 EFNA1P20827 205 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 L1CAMP32004 1257 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 DUSP3P51452 185 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SLC43A2Q8N370 569 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 ARL14EPQ8N8R7 260 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 OR8S1Q8NH09 359 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 RXFP3Q9NSD7 469 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 CBY1Q9Y3M2 126 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms