RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 DAPK2Q9UIK4 370 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 TLR4O00206 839 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 CPNE3O75131 537 aaKnown RBP12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 AHSA1O95433 338 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 GSTM3P21266 225 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 FUT4P22083 530 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 OPRD1P41143 372 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 SPATS1Q496A3 300 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 SFT2D3Q587I9 215 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 KLHL24Q6TFL4 600 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 IKBIPQ70UQ0 350 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 FRMD1Q8N878 549 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 IL17RCQ8NAC3 791 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 DENND6BQ8NEG7 585 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 SOX17Q9H6I2 414 aaPredicted RBP12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 GPR45Q9Y5Y3 372 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 GABRR3A8MPY1 467 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 TLX2O43763 284 aaPredicted RBP12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 SORBS2O94875 1100 aaKnown RBP12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 RCBTB2O95199 551 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 PAX7P23759 505 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 MC3RP41968 323 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 ARSFP54793 590 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 COX10Q12887 443 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 TRAM2Q15035 370 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 GAL3ST3Q96A11 431 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 TMEM125Q96AQ2 219 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 TRIM2Q9C040 744 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 CMTM6Q9NX76 183 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 IFT52Q9Y366 437 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 NAALAD2Q9Y3Q0 740 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 ATAD5Q96QE3 1844 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 ANTXRLA6NF34 631 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 KLHL18O94889 574 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 CTSLP07711 333 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 HIST1H1TP22492 207 aaPredicted RBP12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 ACVR2AP27037 513 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 XCR1P46094 333 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 ALDH3A2P51648 485 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 RPS6KA3P51812 740 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 METAP1P53582 386 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 RPS15P62841 145 aaKnown RBP12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 GPR18Q14330 331 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 KCTD8Q6ZWB6 473 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 PACRGLQ8N7B6 248 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 UXS1Q8NBZ7 420 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 OR52N2Q8NGI0 321 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 OR9A2Q8NGT5 310 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 LYSMD1Q96S90 227 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 SERINC2Q96SA4 455 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 EPYCQ99645 322 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 PELOQ9BRX2 385 aaKnown RBP12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 PTGES2Q9H7Z7 377 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 CCM2LQ9NUG4 571 aaPredicted RBP12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 CLEC4AQ9UMR7 237 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 TPRP12270 2363 aaKnown RBP12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 COL11A1P12107 1806 aaPredicted RBP12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 DAPL1A0PJW8 107 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 TNFRSF1BP20333 461 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 OTX2P32243 289 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 TMED10P49755 219 aaKnown RBP12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 ACVR1Q04771 509 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 ITGADQ13349 1161 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 MADCAM1Q13477 382 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 KRR1Q13601 381 aaKnown RBP12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.46□□□□□ -0.413e-7■■■□□ 17.4
PTPRN2-202ENST00000389416 LIN52Q52LA3 116 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 TRIM61Q5EBN2 209 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 COQ5Q5HYK3 327 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 EZH1Q92800 747 aaPredicted RBP12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 FBXL20Q96IG2 436 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 SLC6A16Q9GZN6 736 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 P2RY12Q9H244 342 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 TOR3AQ9H497 397 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 PLGRKTQ9HBL7 147 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 NEK6Q9HC98 313 aa12.46□□□□□ -0.41
PTPRN2-202ENST00000389416 LOC100130705A0A1B0GUX0 176 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 OR7A17O14581 309 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 SLCO2B1O94956 709 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 PEX11BO96011 259 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 ALDOCP09972 364 aaKnown RBP12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 DDCP20711 480 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 MS4A2Q01362 244 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 ADAM15Q13444 863 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 CCNIQ14094 377 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 CES4AQ5XG92 561 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 MZT2AQ6P582 158 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 HACD2Q6Y1H2 254 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 Q6ZS52 159 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 OR56A3Q8NH54 315 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 PROKR1Q8TCW9 393 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 G6PC3Q9BUM1 346 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 DUSP23Q9BVJ7 150 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 POLR2J2Q9GZM3 115 aaKnown RBP12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 ZFR2Q9UPR6 939 aaKnown RBP12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 ASXL3Q9C0F0 2248 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 ZNF726A6NNF4 738 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 H0YGG7 62 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms