RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 NUMBP49757 651 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 UBE2E1P51965 193 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 EFNB2P52799 333 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 RAD23BP54727 409 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CLDN20P56880 219 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MORC3Q14149 939 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ELAVL3Q14576 367 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TAF13Q15543 124 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 PPP2R5EQ16537 467 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 EIF2S3LQ2VIR3 472 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 DEFB109BQ30KR1 87 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LRRC24Q50LG9 513 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 REP15Q6BDI9 236 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MRM1Q6IN84 353 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ZNF562Q6V9R5 426 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ACP7Q6ZNF0 438 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 NRROSQ86YC3 692 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CBWD2Q8IUF1 395 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 VSTM4Q8IW00 320 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 GPALPP1Q8IXQ4 340 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LGI3Q8N145 548 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ENDOVQ8N8Q3 282 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ZNF610Q8N9Z0 462 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C11orf65Q8NCR3 313 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 OR1J1Q8NGS3 322 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 OR5W2Q8NH69 310 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SMCR8Q8TEV9 937 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C17orf50Q8WW18 174 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ACOT11Q8WXI4 607 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 NEURL3Q96EH8 262 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 DHTKD1Q96HY7 919 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 RAX2Q96IS3 184 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MAELQ96JY0 434 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MYADMQ96S97 322 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 RAD9AQ99638 391 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CBWD1Q9BRT8 395 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 HDHD3Q9BSH5 251 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 NAA15Q9BXJ9 866 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 AGXT2Q9BYV1 514 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CHRNA10Q9GZZ6 450 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CPVLQ9H3G5 476 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 DUSP21Q9H596 190 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TLE6Q9H808 572 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LMBRD1Q9NUN5 540 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ARL15Q9NXU5 204 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CNOT2Q9NZN8 540 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 H2AFY2Q9P0M6 372 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SEPT10Q9P0V9 454 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 KIF17Q9P2E2 1029 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 HSF4Q9ULV5 492 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CCL26Q9Y258 94 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 COG6Q9Y2V7 657 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 PKP3Q9Y446 797 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SPEF1Q9Y4P9 236 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CPQQ9Y646 472 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 THSD7BQ9C0I4 1608 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 A0A0G2JQZ4 141 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TRBV6-5A0A0K0K1A5 114 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LINC00854A0A1B0GVQ3 168 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TMEM120BA0PK00 339 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 G3V3Y1 287 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C15orf65H3BRN8 121 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 GAPDHSO14556 408 aaPredicted RBP-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 COCHO43405 550 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C2P06681 752 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 IGHV4-31P0DP07 118 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SKILP12757 684 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ALADP13716 330 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 EDN2P20800 178 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 YWHAQP27348 245 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 EFNA4P52798 201 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 NAGLUP54802 743 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 FOLH1Q04609 750 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 BTKQ06187 659 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SYCNQ0VAF6 134 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CHIT1Q13231 466 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 IL18R1Q13478 541 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CBFBQ13951 182 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 GK3PQ14409 553 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 KCTD2Q14681 263 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SYPL1Q16563 259 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LONRF1Q17RB8 773 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C4orf26Q17RF5 130 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LACTB2Q53H82 288 aaPredicted RBP-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CDCA2Q69YH5 1023 aaPredicted RBP-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TRPM8Q7Z2W7 1104 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SNX20Q7Z614 316 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CAMK2N1Q7Z7J9 78 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C17orf82Q86X59 251 aaPredicted RBP-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CCDC117Q8IWD4 279 aaPredicted RBP-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C1orf158Q8N1D5 194 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LRRC43Q8N309 656 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SFRP1Q8N474 314 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 GBGT1Q8N5D6 347 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 EMC1Q8N766 993 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 PXT1Q8NFP0 134 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 OR6P1Q8NGX9 317 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 OR8K5Q8NH50 307 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 PIFOQ8TCI5 191 aa-2.71□□□□□ -2.84
RNU6-1340P-201ENST00000384438 RNF183Q96D59 192 aa-2.71□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms