RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 NMRK1Q9NWW6 199 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 MS4A12Q9NXJ0 267 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 PPT2Q9UMR5 302 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 ATG4BQ9Y4P1 393 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 GPC6Q9Y625 555 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 A0A1W2PNR3 127 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 A0A1W2PR48 441 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 ANKRD33BA6NCL7 494 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 GLOD5A6NK44 160 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 H3BQF6 201 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 PROM1O43490 865 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 NDUFB5O43674 189 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 TYROBPO43914 113 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 FGF17O60258 216 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 PRKRAO75569 313 aaKnown RBP8.63□□□□□ -1.03
HMGN1-202ENST00000380747 F10P00742 488 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 NR2F6P10588 404 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 HSD3B1P14060 373 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 HSD3B2P26439 372 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 SERPINB3P29508 390 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 BUD31P41223 144 aaPredicted RBP8.63□□□□□ -1.03
HMGN1-202ENST00000380747 MAPK12P53778 367 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 FOXA1P55317 472 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 TAS2R50P59544 299 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 ARG2P78540 354 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 HMGCS1Q01581 520 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 BTKQ06187 659 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 ZNF33BQ06732 778 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 CSTF3Q12996 717 aaKnown RBP8.63□□□□□ -1.03
HMGN1-202ENST00000380747 MFAP5Q13361 173 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 IMPG1Q17R60 797 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 BEND6Q5SZJ8 279 aaPredicted RBP8.63□□□□□ -1.03
HMGN1-202ENST00000380747 ABHD17BQ5VST6 288 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 SLC6A19Q695T7 634 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 MRM1Q6IN84 353 aaKnown RBP8.63□□□□□ -1.03
HMGN1-202ENST00000380747 ZCCHC23Q6ZST2 131 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 PAGE2Q7Z2X7 111 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 COMMD6Q7Z4G1 85 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 EXOC3L1Q86VI1 746 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 OR4N5Q8IXE1 308 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 METTL4Q8N3J2 472 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 C1orf52Q8N6N3 182 aaKnown RBP8.63□□□□□ -1.03
HMGN1-202ENST00000380747 GBP7Q8N8V2 638 aaPredicted RBP8.63□□□□□ -1.03
HMGN1-202ENST00000380747 PPP1R14CQ8TAE6 165 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 CNDP1Q96KN2 507 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 LMF1Q96S06 567 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 ILKAPQ9H0C8 392 aaPredicted RBP8.63□□□□□ -1.03
HMGN1-202ENST00000380747 NEUROD4Q9HD90 331 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 KCNK9Q9NPC2 374 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 ADAP2Q9NPF8 381 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 SLAMF7Q9NQ25 335 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 PLA2G3Q9NZ20 509 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 VPS29Q9UBQ0 182 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 TEKT2Q9UIF3 430 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 ADAM29Q9UKF5 820 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 FIS1Q9Y3D6 152 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 ASB4Q9Y574 426 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 NUP210LQ5VU65 1888 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 POLQO75417 2590 aa8.63□□□□□ -1.03
HMGN1-202ENST00000380747 SYNDIG1LA6NDD5 238 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 AIFM1O95831 613 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-202ENST00000380747 MLLT10P55197 1068 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 FOLH1Q04609 750 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 TBL3Q12788 808 aaKnown RBP8.62□□□□□ -1.03
HMGN1-202ENST00000380747 SERTAD2Q14140 314 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 ELAVL1Q15717 326 aaKnown RBP8.62□□□□□ -1.03
HMGN1-202ENST00000380747 PLEKHN1Q494U1 663 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-202ENST00000380747 SPDYAQ5MJ70 313 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 IGFL3Q6UXB1 125 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 CRLF3Q8IUI8 442 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 TMEM132CQ8N3T6 1108 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 KIF2BQ8N4N8 673 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 SLC5A8Q8N695 610 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 GALNT11Q8NCW6 608 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 CATSPER1Q8NEC5 780 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 NFAM1Q8NET5 270 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-202ENST00000380747 B3GNT7Q8NFL0 401 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 DNAJB14Q8TBM8 379 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 TANKQ92844 425 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 UCN3Q969E3 161 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 PNPLA2Q96AD5 504 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 ANKRD9Q96BM1 317 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-202ENST00000380747 PGM2Q96G03 612 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 ZNF354BQ96LW1 612 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 DGAT2Q96PD7 388 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 TRMOQ9BU70 441 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 ACPTQ9BZG2 426 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 STMN4Q9H169 189 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-202ENST00000380747 EML4Q9HC35 981 aaKnown RBP8.62□□□□□ -1.03
HMGN1-202ENST00000380747 TNFRSF12AQ9NP84 129 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 MMP25Q9NPA2 562 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 TEX10Q9NXF1 929 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-202ENST00000380747 STMN3Q9NZ72 180 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 ABI3Q9P2A4 366 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 B3GNT3Q9Y2A9 372 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 CLDN16Q9Y5I7 305 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 CSAG2Q9Y5P2 127 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 CLCA3PQ9Y6N3 262 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 HIVEP3Q5T1R4 2406 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms