RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PGM3O95394 542 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 BCHEP06276 602 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 NR2F6P10588 404 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 TNFRSF1BP20333 461 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 DNAJA1P31689 397 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 MPIP34949 423 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 CXCL12P48061 93 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 ARHGDIAP52565 204 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 ITGA1P56199 1179 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 LAPTM4AQ15012 233 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 ABHD13Q7L211 337 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 TSEN54Q7Z6J9 526 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 SLC44A2Q8IWA5 706 aaPredicted RBP18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 SPACA7Q96KW9 195 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 ZNF681Q96N22 645 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 RDH12Q96NR8 316 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 SEMA3GQ9NS98 782 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 POMT2Q9UKY4 750 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 MYRFQ9Y2G1 1151 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 C5orf58C9J3I9 102 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 H3BNH8 94 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 HS6ST1O60243 411 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 SEC24DO94855 1032 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 IFNA14P01570 189 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 C9P02748 559 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 ST6GAL1P15907 406 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 CPN2P22792 545 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 BUD31P41223 144 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 OR1E2P47887 323 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 FASLGP48023 281 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 LIM2P55344 173 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 CEBPEQ15744 281 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 GPR19Q15760 415 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 IFI44LQ53G44 452 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 RPS26P11Q5JNZ5 115 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 PATL1Q86TB9 770 aaKnown RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 ARL10Q8N8L6 244 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 SMYD1Q8NB12 490 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 RMND5BQ96G75 393 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 TMEM19Q96HH6 336 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 SLC35G5Q96KT7 338 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 PSME2Q9UL46 239 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 SIT1Q9Y3P8 196 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 ZNF780BQ9Y6R6 833 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 VGLL3A8MV65 326 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 K7ESF4 209 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 ZSCAN9O15535 394 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 B3GALT2O43825 422 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 UBXN7O94888 489 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 ALOX12P18054 663 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 CSNK1EP49674 416 aaKnown RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 PRKAG1P54619 331 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 TNFRSF17Q02223 184 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 MAPK11Q15759 364 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 CYP27C1Q4G0S4 372 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 TTC33Q6PID6 262 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 TMEM64Q6YI46 380 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 APLFQ8IW19 511 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 ZNF655Q8N720 491 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 C10orf90Q96M02 699 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 MBOAT4Q96T53 435 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 OR51I1Q9H343 314 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 SEMA6CQ9H3T2 930 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 REEP1Q9H902 201 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 FAM60AQ9NP50 221 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 GIMAP4Q9NUV9 329 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 NDUFAF4Q9P032 175 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 TMEFF2Q9UIK5 374 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 PHF11Q9UIL8 331 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 DAPP1Q9UN19 280 aa18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 SAMHD1Q9Y3Z3 626 aaKnown RBP18.73■□□□□ 0.59
PDLIM5-205ENST00000380180 PRAMEF25A6NGN4 478 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 HCRTR1O43613 425 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 CLPTM1O96005 669 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 OR12D1P0DN82 309 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 FPR1P21462 350 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 MATN1P21941 496 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 NXPH1P58417 271 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 TMEM107Q6UX40 140 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 SLC36A4Q6YBV0 504 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 PRSS41Q7RTY9 318 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 UBALD2Q8IYN6 164 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 OR5D16Q8NGK9 328 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 MUS81Q96NY9 551 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 MRPS26Q9BYN8 205 aaKnown RBP18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 RUBCNLQ9H714 662 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 IL21RQ9HBE5 538 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 TMEM74BQ9NUR3 256 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 FAM118AQ9NWS6 357 aa18.72■□□□□ 0.59
PDLIM5-205ENST00000380180 AQP9O43315 295 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 DPM1O60762 260 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 ATP6V1B1P15313 513 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 ZNF10P21506 573 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 CDH3P22223 829 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 VSX2P58304 361 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 OLR1P78380 273 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 MLLT1Q03111 559 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 DUSP7Q16829 419 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 MANEAQ5SRI9 462 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 XAGE5Q8WWM1 108 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms