RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ITGA10O75578 1167 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 MT-ND2P03891 347 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 FADDQ13158 208 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 PRPF38BQ5VTL8 546 aaKnown RBP14.38□□□□□ -0.11
NPHP4-201ENST00000378156 FNDC8Q8TC99 324 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 CDCA3Q99618 268 aaPredicted RBP14.38□□□□□ -0.11
NPHP4-201ENST00000378156 SLC30A3Q99726 388 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 AIFM2Q9BRQ8 373 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 LGR4Q9BXB1 951 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 OR8D2Q9GZM6 311 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 ACTL8Q9H568 366 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 H7C2Y5 167 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 L7N2F9 121 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 FBP2O00757 339 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 CLECL1Q8IZS7 167 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 GHDCQ8N2G8 530 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 MOAP1Q96BY2 351 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF597Q96LX8 424 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 TBX5Q99593 518 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 FZD3Q9NPG1 666 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 DNAJC27Q9NZQ0 273 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 HSFX1Q9UBD0 423 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 TLX2O43763 284 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 ARL6IP5O75915 188 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 SLITRK5O94991 958 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 BMP8BP34820 402 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 SLC7A9P82251 487 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 RPL6Q02878 288 aaKnown RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 SLAMF1Q13291 335 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 RCAN2Q14206 197 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 BMP8AQ7Z5Y6 402 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 MARCH9Q86YJ5 346 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 LINC01465Q8N7H1 131 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 PHOSPHO1Q8TCT1 267 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 ISG20Q96AZ6 181 aaKnown RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 MMABQ96EY8 250 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 SLC39A13Q96H72 371 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 PLEKHA1Q9HB21 404 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 ALKBH4Q9NXW9 302 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 VAPAQ9P0L0 249 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 GMPR2Q9P2T1 348 aaKnown RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 TCRBV3S1A0A5B6 114 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 SH3PXD2BA1X283 911 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 MITFO75030 526 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 ATXN1LP0C7T5 689 aaKnown RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF3P17036 446 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 GNALP38405 381 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 MAGEA8P43361 318 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF140P52738 457 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 C4orf46Q504U0 113 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 FAM26DQ5JW98 314 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 PRAMEF17Q5VTA0 474 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 UNC5DQ6UXZ4 953 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 ASB18Q6ZVZ8 466 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 SDR16C5Q8N3Y7 309 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 GALNT6Q8NCL4 622 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 PHOSPHO2Q8TCD6 241 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 ZDHHC12Q96GR4 267 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 CD180Q99467 661 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 EPYCQ99645 322 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 FBRSQ9HAH7 460 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 PCDHB14Q9Y5E9 798 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 GPR45Q9Y5Y3 372 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 RBMXL2O75526 392 aaKnown RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 JUNDP17535 347 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 IGFBP6P24592 240 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 RAB28P51157 221 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 CBFBQ13951 182 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 HNRNPA1L2Q32P51 320 aaKnown RBP14.37□□□□□ -0.11
NPHP4-201ENST00000378156 C1orf189Q5VU69 101 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 GPR26Q8NDV2 337 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 FRS2Q8WU20 508 aa14.37□□□□□ -0.11
NPHP4-201ENST00000378156 SEMA3BQ13214 749 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 MANEALQ5VSG8 457 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 HS3ST5Q8IZT8 346 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 JPH3Q8WXH2 748 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-201ENST00000378156 HPF1Q9NWY4 346 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 MAB21L2Q9Y586 359 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 CH25HO95992 272 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 CEBPBP17676 345 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF542PQ5EBM4 170 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 MSANTD1Q6ZTZ1 278 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 RETREG3Q86VR2 466 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 LILRA2Q8N149 483 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 TCEAL4Q96EI5 215 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 UBXN10Q96LJ8 280 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 TSSK6Q9BXA6 273 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 APOBEC3BQ9UH17 382 aaKnown RBP14.36□□□□□ -0.11
NPHP4-201ENST00000378156 RTCAO00442 366 aaKnown RBP14.36□□□□□ -0.11
NPHP4-201ENST00000378156 CATSPEREQ5SY80 951 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 SLC22A15Q8IZD6 547 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 TMEM156Q8N614 296 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 NETO1Q8TDF5 533 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 TFAP2CQ92754 450 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 APIPQ96GX9 242 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 SCGB3A2Q96PL1 93 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 MCHR1Q99705 422 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 TNFRSF10DQ9UBN6 386 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 SLC1A7O00341 560 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 TACSTD2P09758 323 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms