RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZFR2Q9UPR6 939 aaKnown RBP8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PADI2Q9Y2J8 665 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 A0A1W2PQ09 198 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 XKRYO14609 159 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 CELP19835 753 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 SERINC5Q86VE9 423 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PGBD3Q8N328 593 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 FAM110BQ8TC76 370 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM40Q8WWA1 233 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 ABCG5Q9H222 651 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 ELAC1Q9H777 363 aaKnown RBP8.38□□□□□ -1.07
PCDH9-202ENST00000377865 TAC3Q9UHF0 121 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 FBXL21Q9UKT6 434 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 LIPT1Q9Y234 373 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 SLX4Q8IY92 1834 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 DNASE1L1P49184 302 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 SEMG2Q02383 582 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 ACVR1Q04771 509 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 C4orf46Q504U0 113 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 NXPE4Q6UWF7 544 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 QSOX2Q6ZRP7 698 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 RD3Q7Z3Z2 195 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 CADM2Q8N3J6 435 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 SCRN2Q96FV2 425 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 MGAT4AQ9UM21 535 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 MED31Q9Y3C7 131 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 FXYD6-FXYD2A0A087WZ82 144 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 HHLA1C9JL84 531 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PRAF2O60831 178 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 DRD2P14416 443 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 GRK6P43250 576 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 WDR5P61964 334 aaKnown RBP8.38□□□□□ -1.07
PCDH9-202ENST00000377865 SWI5Q1ZZU3 235 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 ZCCHC12Q6PEW1 402 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 GALNT10Q86SR1 603 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 NLRP8Q86W28 1048 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 NRSN1Q8IZ57 195 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 CLDN22Q8N7P3 220 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF248Q8NDW4 579 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PROKR2Q8NFJ6 384 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 OR8J2Q8NGG1 315 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 SLC39A13Q96H72 371 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 MED30Q96HR3 178 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PTPN18Q99952 460 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 BOCQ9BWV1 1114 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 FXYD6Q9H0Q3 95 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM39AQ9NV64 488 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 WDR70Q9NW82 654 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PPIEQ9UNP9 301 aaKnown RBP8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PCDHGA3Q9Y5H0 932 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 CACNG2Q9Y698 323 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 A0A0G2JPF8 293 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 A0A1B0GTW7 788 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 SMIM30A4D0T7 59 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 C2orf78A6NCI8 922 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PCP4L1A6NKN8 68 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 HNRNPCL3B7ZW38 293 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 STC2O76061 302 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 KDM4BO94953 1096 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 HNRNPCL4P0DMR1 293 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 OR12D1P0DN82 309 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 PTBP1P26599 531 aaKnown RBP eCLIP8.38□□□□□ -1.071e-7■■■■■ 30.3
PCDH9-202ENST00000377865 SOX3P41225 446 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 HK3P52790 923 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 DEFA5Q01523 94 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 CCL14Q16627 93 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 LRRC73Q5JTD7 316 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 OTUD1Q5VV17 481 aaPredicted RBP8.38□□□□□ -1.07
PCDH9-202ENST00000377865 Q6ZSR9 355 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 DYNC2LI1Q8TCX1 351 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 MAL2Q969L2 176 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 RNF31Q96EP0 1072 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 DPCDQ9BVM2 203 aaPredicted RBP8.38□□□□□ -1.07
PCDH9-202ENST00000377865 MYNNQ9NPC7 610 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 TAS2R10Q9NYW0 307 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 TBC1D24Q9ULP9 559 aa8.38□□□□□ -1.07
PCDH9-202ENST00000377865 NFATC1O95644 943 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 CH25HO95992 272 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 RENP00797 406 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 RPL17P18621 184 aaKnown RBP8.37□□□□□ -1.07
PCDH9-202ENST00000377865 CSNK1DP48730 415 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 PITPNBP48739 271 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 SLC11A1P49279 550 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 FLT3LGP49771 235 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 TBPL1P62380 186 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 ACTA2P62736 377 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 ACTG2P63267 376 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 SLC35A2P78381 396 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 GAS6Q14393 721 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 NFE2L1Q14494 772 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 COL28A1Q2UY09 1125 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 CTU2Q2VPK5 515 aaKnown RBP8.37□□□□□ -1.07
PCDH9-202ENST00000377865 LRIF1Q5T3J3 769 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 LRRTM4Q86VH4 590 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 PIANPQ8IYJ0 282 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 RPL3LQ92901 407 aaKnown RBP8.37□□□□□ -1.07
PCDH9-202ENST00000377865 ZSWIM3Q96MP5 696 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 YIPF4Q9BSR8 244 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 NIPAL2Q9H841 368 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 KLHL21Q9UJP4 597 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms