RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZBED5Q49AG3 693 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 TTLL10Q6ZVT0 673 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 PHOSPHO1Q8TCT1 267 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 PEX11GQ96HA9 241 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 POLR2J2Q9GZM3 115 aaKnown RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 IKZF2Q9UKS7 526 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 MKLN1Q9UL63 735 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 MGAT4BQ9UQ53 548 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 KIF13BQ9NQT8 1826 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 FOXE1O00358 373 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 TLX2O43763 284 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 ZNF888P0CJ79 500 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 PTGER1P34995 402 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 SMSP52788 366 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 DPTQ07507 201 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 VEZF1Q14119 521 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 FLYWCH1Q4VC44 716 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 XKR7Q5GH72 579 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 CES4AQ5XG92 561 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 PTCRAQ6ISU1 281 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 SCAIQ8N9R8 606 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 SUN3Q8TAQ9 357 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 FCGR1BQ92637 280 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 FGF22Q9HCT0 170 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 DCAF13Q9NV06 445 aaKnown RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 USP22Q9UPT9 525 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 SCDO00767 359 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 CASKO14936 926 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 PIM1P11309 404 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 HIST1H1TP22492 207 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 CD38P28907 300 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 DEFB133Q30KQ1 61 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 CPZQ66K79 652 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 CYHR1Q6ZMK1 362 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 SERPINA11Q86U17 422 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 SIX5Q8N196 739 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 METTL4Q8N3J2 472 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 COQ10AQ96MF6 247 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 CNOT11Q9UKZ1 510 aaKnown RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 MRPS7Q9Y2R9 242 aaKnown RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 C9J4A7 227 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 XPNPEP2O43895 674 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 PCDHGA12O60330 932 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 AHCYP23526 432 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 CCKBRP32239 447 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 HBA1P69905 142 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 KLHL22Q53GT1 634 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 ZNF57Q68EA5 555 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 RNF31Q96EP0 1072 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 FEVQ99581 238 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 TSSK6Q9BXA6 273 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 MKRN2Q9H000 416 aaKnown RBP13.8□□□□□ -0.2
TCOF1-202ENST00000377797 IFT52Q9Y366 437 aa13.8□□□□□ -0.2
TCOF1-202ENST00000377797 HPRP00739 348 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 METAP1P53582 386 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 ADPRHP54922 357 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 OR2L8Q8NGY9 312 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 C19orf43Q9BQ61 176 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 C1QTNF3Q9BXJ4 246 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 NECTIN3Q9NQS3 549 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 TAAR2Q9P1P5 351 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 MED31Q9Y3C7 131 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 PLEKHM1Q9Y4G2 1056 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 DENRO43583 198 aaKnown RBP13.79□□□□□ -0.2
TCOF1-202ENST00000377797 KLK3P07288 261 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-202ENST00000377797 TUBA4AP68366 448 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 RPP38P78345 283 aaKnown RBP13.79□□□□□ -0.2
TCOF1-202ENST00000377797 MLLT1Q03111 559 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-202ENST00000377797 TMEM215Q68D42 235 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 OR10H4Q8NGA5 316 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 GAL3ST3Q96A11 431 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 TP53INP1Q96A56 240 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 AREL1O15033 823 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 CHST10O43529 356 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 CD36P16671 472 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 RHCEP18577 417 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 MYL9P24844 172 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 PSMA3P25788 255 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 GSTM2P28161 218 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 NUDT1P36639 197 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 DCTP40126 519 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 TPMTP51580 245 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 CAMK1Q14012 370 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 TIGD6Q17RP2 521 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 UGT3A2Q3SY77 523 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 C6orf141Q5SZD1 244 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 RSBN1Q5VWQ0 802 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-202ENST00000377797 METRNLQ641Q3 311 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 KIAA0895LQ68EN5 471 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 PLXDC1Q8IUK5 500 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 TCEANCQ8N8B7 351 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 OR52P1PQ8NH57 321 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 SNX33Q8WV41 574 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 ATG2BQ96BY7 2078 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 OPRD1P41143 372 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 GRM7Q14831 915 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.79□□□□□ -0.2
TCOF1-202ENST00000377797 FIGNL1Q6PIW4 674 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 FRS2Q8WU20 508 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms