RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 DGCR6LQ9BY27 220 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ACPTQ9BZG2 426 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 MKKSQ9NPJ1 570 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 NECTIN3Q9NQS3 549 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 UCKL1Q9NWZ5 548 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 TOR4AQ9NXH8 423 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 IGHV3-20A0A0C4DH32 117 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 LINC00854A0A1B0GVQ3 168 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 CLEC3AO75596 197 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 TNFSF15O95150 251 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 PEPDP12955 493 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ETFAP13804 333 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 DRD2P14416 443 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ELF3P78545 371 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.04□□□□□ -1.124e-6■■■□□ 16.3
CRNKL1-202ENST00000377340 GFOD2Q3B7J2 385 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 EIPR1Q53HC9 387 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 GUSBP11Q6P575 273 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 IL20RBQ6UXL0 311 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 OR52E4Q8NGH9 312 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 OR6K6Q8NGW6 343 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 GAL3ST3Q96A11 431 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ECHDC3Q96DC8 303 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 THAP11Q96EK4 314 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 UBXN10Q96LJ8 280 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 SERINC2Q96SA4 455 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ADOQ96SZ5 270 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 OR51I1Q9H343 314 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 AMBNQ9NP70 447 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 BRD7Q9NPI1 651 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 POMPQ9Y244 141 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 C2orf92A0A1B0GVN3 265 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 SRRM3A6NNA2 597 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF726A6NNF4 738 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 TLX3O43711 291 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 SOX30O94993 753 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 CD160O95971 181 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 PCSK2P16519 638 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF24P17028 368 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 AOC1P19801 751 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 SLC5A2P31639 672 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 GPLD1P80108 840 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 DCDP81605 110 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 BNIP1Q12981 228 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 GALNT18Q6P9A2 607 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 TLDC1Q6P9B6 456 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 PIGWQ7Z7B1 504 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF683Q8IZ20 524 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 C8orf59Q8N0T1 100 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 VWA5B2Q8N398 1253 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 CANT1Q8WVQ1 401 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 MAL2Q969L2 176 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 BMFQ96LC9 184 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 DOHHQ9BU89 302 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 CADM1Q9BY67 442 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 EBF2Q9HAK2 575 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 EBF1Q9UH73 591 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 PTBP2Q9UKA9 531 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 ACAD8Q9UKU7 415 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 BRCA1P38398 1863 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 PRKRAO75569 313 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 CH25HO95992 272 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 IFNGP01579 166 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 CELA2BP08218 269 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 NPPBP16860 134 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 TAS2R38P59533 333 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 BROXQ5VW32 411 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 TTC23Q5W5X9 447 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 NANOGP8Q6NSW7 305 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 REEP3Q6NUK4 255 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 GPR153Q6NV75 609 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 ADCK1Q86TW2 530 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 CADM4Q8NFZ8 388 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 OR6N1Q8NGY5 312 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 SLC22A8Q8TCC7 542 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 NUDT22Q9BRQ3 303 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 NANOGQ9H9S0 305 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 KLHL42Q9P2K6 505 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 PARP14Q460N5 1801 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 SLC5A10A0PJK1 596 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 NOBOXO60393 691 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 AHSA1O95433 338 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 RPS17P08708 135 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 GLB1P16278 677 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 MAGEA3P43357 314 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 CLDN8P56748 225 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 SERTAD2Q14140 314 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 CRB2Q5IJ48 1285 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 TMEM225Q6GV28 225 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 TMEM207Q6UWW9 146 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 PDPRQ8NCN5 879 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 FAM81AQ8TBF8 368 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 PPP1R14AQ96A00 147 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 L3HYPDHQ96EM0 354 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 MCHR1Q99705 422 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 GABRG3Q99928 467 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 TXLNGYQ9BZA5 131 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 POLR2J3Q9H1A7 115 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 EPHX3Q9H6B9 360 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 RNPEPL1Q9HAU8 725 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms