RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ZNF689Q96CS4 500 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 DMRTB1Q96MA1 342 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 MND1Q9BWT6 205 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 SRRQ9GZT4 340 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 POLR2J3Q9H1A7 115 aaKnown RBP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 RERGLQ9H628 205 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 MVB12BQ9H7P6 319 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 A4GALTQ9NPC4 353 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 NDUFB11Q9NX14 153 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 NPAP1Q9NZP6 1156 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 HYKKA2RU49 373 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 AGRPO00253 132 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 TP53P04637 393 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-202ENST00000376839 H1F0P07305 194 aaKnown RBP12.55□□□□□ -0.4
ACTN1-202ENST00000376839 CLEC2LP0C7M8 214 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 IL7P13232 177 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF24P17028 368 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 TNNI3P19429 210 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 NFE2L1Q14494 772 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 NCF4Q15080 339 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 MFSD4BQ5TF39 518 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 CASP12Q6UXS9 341 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 IKBIPQ70UQ0 350 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 OLIG3Q7RTU3 272 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 SLC30A8Q8IWU4 369 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 PHC2Q8IXK0 858 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 SLC7A13Q8TCU3 470 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF717Q9BY31 904 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-202ENST00000376839 SPHK2Q9NRA0 654 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 SEMA3GQ9NS98 782 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 DDX28Q9NUL7 540 aaKnown RBP12.55□□□□□ -0.4
ACTN1-202ENST00000376839 TVP23BQ9NYZ1 205 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 MGAT4BQ9UQ53 548 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 NOX1Q9Y5S8 564 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 CKAP5Q14008 2032 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 ANHXE9PGG2 379 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 TFECO14948 347 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-202ENST00000376839 LRRTM2O43300 516 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 PRKYO43930 277 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 UGT2B17O75795 530 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 MANFP55145 182 aaKnown RBP12.55□□□□□ -0.4
ACTN1-202ENST00000376839 TARDBPQ13148 414 aaKnown RBP eCLIP12.55□□□□□ -0.4
ACTN1-202ENST00000376839 MADCAM1Q13477 382 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 FLYWCH1Q4VC44 716 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 PRAMEF14Q5SWL7 426 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 HMGN2P46Q86SG4 172 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF547Q8IVP9 402 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 SETD6Q8TBK2 473 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 TMEM203Q969S6 136 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 ST6GAL2Q96JF0 529 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 MMP28Q9H239 520 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 SERHL2Q9H4I8 314 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 WDR70Q9NW82 654 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 RPL36Q9Y3U8 105 aaKnown RBP12.55□□□□□ -0.4
ACTN1-202ENST00000376839 PCDHGB2Q9Y5G2 931 aa12.55□□□□□ -0.4
ACTN1-202ENST00000376839 PCYT1BQ9Y5K3 369 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-202ENST00000376839 SMIM30A4D0T7 59 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 HMGN4O00479 90 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 FAAHO00519 579 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 SPINT1O43278 529 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 SH3BP5O60239 455 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 CDRT1O95170 752 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 DDCP20711 480 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 TLE2Q04725 743 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 PIN1Q13526 163 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-202ENST00000376839 LARS2Q15031 903 aaKnown RBP12.54□□□□□ -0.4
ACTN1-202ENST00000376839 NDUFA5Q16718 116 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 OR8J1Q8NGP2 316 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 UCN3Q969E3 161 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 DTD2Q96FN9 168 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 DHRS1Q96LJ7 313 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 SIRT3Q9NTG7 399 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-202ENST00000376839 YARS2Q9Y2Z4 477 aaKnown RBP12.54□□□□□ -0.4
ACTN1-202ENST00000376839 PRAMEF27A3QJZ7 478 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 KPNA3O00505 521 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-202ENST00000376839 TLX2O43763 284 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-202ENST00000376839 APOL3O95236 402 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 ITGB7P26010 798 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 MAPK12P53778 367 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 SLAMF1Q13291 335 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 HEPACAMQ14CZ8 416 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 TEAD2Q15562 447 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 GDPGP1Q6ZNW5 385 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 FAM83HQ6ZRV2 1179 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-202ENST00000376839 C6orf120Q7Z4R8 191 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 FAM129CQ86XR2 697 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 PROKR2Q8NFJ6 384 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 OR9Q1Q8NGQ5 310 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 TM4SF18Q96CE8 201 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 WDFY2Q96P53 400 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 OR2B2Q9GZK3 357 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 MIXL1Q9H2W2 232 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 ABCB9Q9NP78 766 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 SSR3Q9UNL2 185 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 CARD8Q9Y2G2 431 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 GRIP1Q9Y3R0 1128 aa12.54□□□□□ -0.4
ACTN1-202ENST00000376839 CMAHPQ9Y471 501 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms