RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 ZNF442Q9H7R0 627 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 ABRACLQ9P1F3 81 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 TTC24A2A3L6 582 aaPredicted RBP11.99□□□□□ -0.49
VPS13A-204ENST00000376634 MTX2O75431 263 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 IFNA17P01571 189 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 DNAJB1P25685 340 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 PREPP48147 710 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 SLC27A4Q6P1M0 643 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 CLEC4CQ8WTT0 213 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 GCDHQ92947 438 aaPredicted RBP11.99□□□□□ -0.49
VPS13A-204ENST00000376634 C17orf62Q9BQA9 187 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 SLC2A4RGQ9NR83 387 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 TUBG2Q9NRH3 451 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 CASC3O15234 703 aaKnown RBP11.99□□□□□ -0.49
VPS13A-204ENST00000376634 GNB3P16520 340 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 DPY19L3Q6ZPD9 716 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 IL17RCQ8NAC3 791 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 EBF4Q9BQW3 602 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 SEZ6LQ9BYH1 1024 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 HOXB2P14652 356 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 FBLP22087 321 aaKnown RBP11.99□□□□□ -0.49
VPS13A-204ENST00000376634 HOXC8P31273 242 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 PRKXP51817 358 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 RPLP0P6Q8NHW5 317 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 TRMT10AQ8TBZ6 339 aaKnown RBP11.99□□□□□ -0.49
VPS13A-204ENST00000376634 TFGQ92734 400 aaPredicted RBP11.99□□□□□ -0.49
VPS13A-204ENST00000376634 PITX2Q99697 317 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 PIP5K1AQ99755 562 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 LILRB5O75023 590 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 ADRB3P13945 408 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 UFM1P61960 85 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 MYLK3Q32MK0 819 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 SLC2A7Q6PXP3 512 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 NAPRTQ6XQN6 538 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 CLEC20AQ6ZU45 233 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 DPY19L4Q7Z388 723 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 THAP4Q8WY91 577 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 TFAP2BQ92481 460 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 TMEM9Q9P0T7 183 aa11.99□□□□□ -0.49
VPS13A-204ENST00000376634 TYRP14679 529 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 PRKCAP17252 672 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 C7orf57Q8NEG2 295 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 PGAM5Q96HS1 289 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 TMEM246Q9BRR3 403 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 CLEC4EQ9ULY5 219 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 INSL6Q9Y581 213 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 TMEM14AQ9Y6G1 99 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 CHD3Q12873 2000 aaKnown RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 COL3A1P02461 1466 aaPredicted RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 FAM227AF5H4B4 570 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 RPS21P63220 83 aaKnown RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 RAET1LQ5VY80 246 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 LIX1LQ8IVB5 337 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 PIK3C2AO00443 1686 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 BCAS1O75363 584 aaPredicted RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 AKR1C2P52895 323 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 RBM39Q14498 530 aaKnown RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 KIF18BQ86Y91 864 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 KLHL21Q9UJP4 597 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 LCHNA4D1U4 455 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 XRCC1P18887 633 aaPredicted RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 GAS6Q14393 721 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 NTRK2Q16620 822 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 TRIM46Q7Z4K8 759 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 PDSS2Q86YH6 399 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 NTAN1Q96AB6 310 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 C2orf74A8MZ97 194 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 DNM1LO00429 736 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 RFPL1O75677 317 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 CST3P01034 146 aaPredicted RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 CD9P21926 228 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 GDF10P55107 478 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 SLC36A3Q495N2 470 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 ELMOD2Q8IZ81 293 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 FAM84AQ96KN4 292 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 TMEM45AQ9NWC5 275 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 GSK3BP49841 420 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 RRAS2P62070 204 aaPredicted RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 FADDQ13158 208 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 ACSBG2Q5FVE4 666 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 ZNF529Q6P280 563 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 TMPRSS12Q86WS5 348 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 ASCC1Q8N9N2 400 aaKnown RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 ZNF420Q8TAQ5 688 aaPredicted RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 APOC3P02656 99 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 RIDAP52758 137 aaKnown RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 RPP30P78346 268 aaKnown RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 ID2Q02363 134 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 MOGQ16653 247 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 LRIT3Q3SXY7 679 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 GALNT10Q86SR1 603 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 LILRB2Q8N423 598 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 OR10Q1Q8NGQ4 319 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 TPT1P8Q9HAU6 139 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 DLGAP4Q9Y2H0 992 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 TRBV2A0A0J9YWF9 115 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 HMX3A6NHT5 357 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 GPR25O00155 361 aa11.98□□□□□ -0.49
VPS13A-204ENST00000376634 POLR1CO15160 346 aaPredicted RBP11.98□□□□□ -0.49
VPS13A-204ENST00000376634 VSX2P58304 361 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms