RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 E2F6O75461 281 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 KRT75O95678 551 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 OR12D1P0DN82 309 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 FASLGP48023 281 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 SHC2P98077 582 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 EEF1A2Q05639 463 aaKnown RBP11.88□□□□□ -0.51
CLCN6-206ENST00000376496 TGM3Q08188 693 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 VEZF1Q14119 521 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 SUZ12Q15022 739 aaKnown RBP11.88□□□□□ -0.51
CLCN6-206ENST00000376496 NHSL2Q5HYW2 709 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 INTS11Q5TA45 600 aaKnown RBP11.88□□□□□ -0.51
CLCN6-206ENST00000376496 UGT2A3Q6UWM9 527 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 USP53Q70EK8 1073 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 OFCC1Q8IZS5 231 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 OR52E4Q8NGH9 312 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 FAM174AQ8TBP5 190 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 SPPL2AQ8TCT8 520 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 SLC38A5Q8WUX1 472 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 XAGE5Q8WWM1 108 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 NEURL3Q96EH8 262 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 PCED1AQ9H1Q7 454 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 DUSP15Q9H1R2 295 aaPredicted RBP11.88□□□□□ -0.51
CLCN6-206ENST00000376496 TAS2R7Q9NYW3 318 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 DNAJB9Q9UBS3 223 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 CNOT11Q9UKZ1 510 aaKnown RBP11.88□□□□□ -0.51
CLCN6-206ENST00000376496 RAB26Q9ULW5 256 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 ENTPD4Q9Y227 616 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 WBP11Q9Y2W2 641 aaKnown RBP11.88□□□□□ -0.51
CLCN6-206ENST00000376496 IGHV5-51A0A0C4DH38 117 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 PRAMEF27A3QJZ7 478 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 PRAMEF25A6NGN4 478 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 B3GALT2O43825 422 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 RDH16O75452 317 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 CAPZBP47756 277 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 BLMHQ13867 455 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 LASP1Q14847 261 aaKnown RBP11.88□□□□□ -0.51
CLCN6-206ENST00000376496 CEP68Q76N32 757 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 EIF3MQ7L2H7 374 aaKnown RBP11.88□□□□□ -0.51
CLCN6-206ENST00000376496 OR2I1PQ8NGU4 316 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 C10orf90Q96M02 699 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 OR51I1Q9H343 314 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 OLAHQ9NV23 265 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 TMEM9Q9P0T7 183 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 LRIT1Q9P2V4 623 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 KCNE3Q9Y6H6 103 aa11.88□□□□□ -0.51
CLCN6-206ENST00000376496 G3V2T6 193 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 HMGN4O00479 90 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SUV39H1O43463 412 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 DENRO43583 198 aaKnown RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SEC24DO94855 1032 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SEPHS1P49903 392 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 MAPK11Q15759 364 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SYPL1Q16563 259 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 WDR45BQ5MNZ6 344 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 TSEN54Q7Z6J9 526 aaKnown RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 MCATQ8IVS2 390 aaKnown RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 ZNF681Q96N22 645 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 NEUROD4Q9HD90 331 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 ACSS1Q9NUB1 689 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 IRAK4Q9NWZ3 460 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 EHD3Q9NZN3 535 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 RPS6KA6Q9UK32 745 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 DAPP1Q9UN19 280 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 A0A0A6YYC8 382 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 RHPN2P1A8MT19 583 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 I3L1I5 382 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 PRSS23O95084 383 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 ARAFP10398 606 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 CSNK2A2P19784 350 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 KCNJ10P78508 379 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 MYBPC1Q00872 1141 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 TNFRSF17Q02223 184 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 CSTF1Q05048 431 aaKnown RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 FADDQ13158 208 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 C14orf28Q4W4Y0 310 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 C6orf132Q5T0Z8 1188 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 CHERPQ8IWX8 916 aaKnown RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SLC35F3Q8IY50 421 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 TMEM19Q96HH6 336 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SERINC2Q96SA4 455 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SOHLH2Q9NX45 425 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SH3GLB1Q9Y371 365 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 GMEB1Q9Y692 573 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 A8MU76 341 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 GUCY1B2O75343 617 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 CDC123O75794 336 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 HMGN2P05204 90 aaKnown RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 FABP3P05413 133 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 DCTP40126 519 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 XKP51811 444 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 MAT1AQ00266 395 aaKnown RBP11.87□□□□□ -0.51
CLCN6-206ENST00000376496 ERV3-1Q14264 604 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SHBQ15464 509 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SYT16Q17RD7 645 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 LYSMD4Q5XG99 296 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 ABHD13Q7L211 337 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 ZDHHC13Q8IUH4 622 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 EID3Q8N140 333 aa11.87□□□□□ -0.51
CLCN6-206ENST00000376496 SLC35G5Q96KT7 338 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms