RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 SIDT2Q8NBJ9 832 aaKnown RBP8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 FANK1Q8TC84 345 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 SPIN2AQ99865 258 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 SPIN2BQ9BPZ2 258 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 METTL8Q9H825 291 aaKnown RBP8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 AMBNQ9NP70 447 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 CACNG2Q9Y698 323 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 BLACEA4D250 179 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 ADAMTS3O15072 1205 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 BUD23O43709 281 aaKnown RBP8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 KCNC1P48547 511 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 CRYZQ08257 329 aaKnown RBP8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 ZNF460Q14592 562 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 ACTBL2Q562R1 376 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 ENPP7Q6UWV6 458 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 COMMD7Q86VX2 200 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 GLIS1Q8NBF1 620 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 SLC35C2Q9NQQ7 365 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 STRCQ7RTU9 1775 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 NCBP2P52298 156 aaKnown RBP eCLIP8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 VAMP2P63027 116 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 BAK1Q16611 211 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 GTF2IRD2BQ6EKJ0 949 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 PXKQ7Z7A4 578 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 GTF2IRD2Q86UP8 949 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 CBARPQ8N350 705 aaPredicted RBP8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 LFNGQ8NES3 379 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 ZNF417Q8TAU3 575 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 PMM1Q92871 262 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 TRAF4Q9BUZ4 470 aaPredicted RBP8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 SYT4Q9H2B2 425 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 NSUN3Q9H649 340 aaKnown RBP8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 TIGARQ9NQ88 270 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 PADI2Q9Y2J8 665 aa8.46□□□□□ -1.06
SHROOM4-202ENST00000376020 ADAM10O14672 748 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 NFATC1O95644 943 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 SCG5P05408 212 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 CLUP10909 449 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 VAMP1P23763 118 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 FLI1Q01543 452 aaPredicted RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 FAM214AQ32MH5 1076 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 CDNFQ49AH0 187 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 TPRG1Q6ZUI0 275 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 CLEC14AQ86T13 490 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 TCEANCQ8N8B7 351 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 PNPLA2Q96AD5 504 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 TMEM233B4DJY2 109 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 PRPS1P60891 318 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 RAB4BP61018 213 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 NFATC2Q13469 925 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 SLC39A4Q6P5W5 647 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 VASH1Q7L8A9 365 aaPredicted RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 PARP16Q8N5Y8 322 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 OR8J2Q8NGG1 315 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 OR52N2Q8NGI0 321 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 SLC39A13Q96H72 371 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 ISYNA1Q9NPH2 558 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 FAM170BA6NMN3 283 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 RHPN2P1A8MT19 583 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 B4GALT5O43286 388 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 GMDSO60547 372 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 NDUFV2P19404 249 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 RBMXP38159 391 aaKnown RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 ECI1P42126 302 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 BRCC3P46736 316 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 SPRED3Q2MJR0 410 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 KIAA1324Q6UXG2 1013 aaKnown RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 CNIH3Q8TBE1 160 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 EXOSC8Q96B26 276 aaKnown RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 BMFQ96LC9 184 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 PKP4Q99569 1192 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 FEVQ99581 238 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 CCDC86Q9H6F5 360 aaKnown RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 SLC22A11Q9NSA0 550 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 PCTPQ9UKL6 214 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 GPR45Q9Y5Y3 372 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 DIDO1Q9BTC0 2240 aaKnown RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 EMX1Q04741 257 aaPredicted RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 FAM83HQ6ZRV2 1179 aaPredicted RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 PIWIL3Q7Z3Z3 882 aaKnown RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 OR6V1Q8N148 313 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 LRR1Q96L50 414 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 YIPF2Q9BWQ6 316 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 ATRXP46100 2492 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 GPR89AB7ZAQ6 455 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 RNF13O43567 381 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 TFPTP0C1Z6 253 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 GPR89BP0CG08 455 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 ATP1B2P14415 290 aaPredicted RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 BLKP51451 505 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 RAB8AP61006 207 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 SELENOWP63302 87 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 ENPP2Q13822 863 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 FNDC3BQ53EP0 1204 aaKnown RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 UBAP2Q5T6F2 1119 aaKnown RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 GTPBP8Q8N3Z3 284 aaPredicted RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 POLMQ9NP87 494 aaPredicted RBP8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 GALPQ9UBC7 116 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 KIF25Q9UIL4 384 aa8.45□□□□□ -1.06
SHROOM4-202ENST00000376020 MYLKQ15746 1914 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms