RNA–Protein interactions for RNA: ENST00000375894.9

CTSL-204, Transcript of cathepsin L, human

TSL 3

Gene CTSL, Length 975 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSL-204	ENST00000375894	RHBDF1	Q96CC6	855 aa		12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	ARSG	Q96EG1	525 aa		12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	SENP5	Q96HI0	755 aa	Predicted RBP	12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	ZNF597	Q96LX8	424 aa		12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	DOHH	Q9BU89	302 aa		12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	ROGDI	Q9GZN7	287 aa		12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	PITHD1	Q9GZP4	211 aa	Predicted RBP	12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	PROK2	Q9HC23	129 aa		12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	PRDM7	Q9NQW5	492 aa		12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	BEX4	Q9NWD9	120 aa	Predicted RBP	12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	WWOX	Q9NZC7	414 aa		12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	CNIH4	Q9P003	139 aa		12.51	□□□□□ -0.41
CTSL-204	ENST00000375894	RAI1	Q7Z5J4	1906 aa	Predicted RBP	12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	FAM171A2	A8MVW0	826 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	RTCA	O00442	366 aa	Known RBP	12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	FGF17	O60258	216 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	LY6G6D	O95868	133 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	CD53	P19397	219 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	CPN2	P22792	545 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	PCSK6	P29122	969 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	STT3A	P46977	705 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	TOMM20	Q15388	145 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	LYPD8	Q6UX82	237 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	SLC29A4	Q7RTT9	530 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	PRIMA1	Q86XR5	153 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	RASGEF1C	Q8N431	466 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	SLC15A4	Q8N697	577 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	ACOT4	Q8N9L9	421 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	LRRN4CL	Q8ND94	238 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	GRK7	Q8WTQ7	553 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	DIO2	Q92813	273 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	PPWD1	Q96BP3	646 aa	Known RBP	12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	TRIB1	Q96RU8	372 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	KRT12	Q99456	494 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	TIMP4	Q99727	224 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	MDFI	Q99750	246 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	CAPS2	Q9BXY5	557 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	DNAJC11	Q9NVH1	559 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	GPRC5B	Q9NZH0	403 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	ASIC3	Q9UHC3	531 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	CHMP2B	Q9UQN3	213 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	SLC6A5	Q9Y345	797 aa		12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	12.5	□□□□□ -0.41
CTSL-204	ENST00000375894	FAM95C	A0A1B0GW59	222 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	ARHGEF9	O43307	516 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	IGKV3-11	P04433	115 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	FBXO45	P0C2W1	286 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	ATP5A1	P25705	553 aa	Known RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	SERPINB3	P29508	390 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	CDC25B	P30305	580 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	SSR2	P43308	183 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	RPL21	P46778	160 aa	Known RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	HERVK_113	P63132	956 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	ERVK-8	P63133	956 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	SORD	Q00796	357 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	PLIN5	Q00G26	463 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	DOC2A	Q14183	400 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.49	□□□□□ -0.41	9e-6	■■□□□ 14.4
CTSL-204	ENST00000375894	CYP1B1	Q16678	543 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	AP5B1	Q2VPB7	878 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894		Q5PR19	223 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	SHE	Q5VZ18	495 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	NSUN5P2	Q63ZY6	315 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	RNF111	Q6ZNA4	994 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	DGAT2L6	Q6ZPD8	337 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	UBE3D	Q7Z6J8	389 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	P3H2	Q8IVL5	708 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	PM20D2	Q8IYS1	436 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	DND1	Q8IYX4	353 aa	Known RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	SRFBP1	Q8NEF9	429 aa	Known RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	ANKRD49	Q8WVL7	239 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	ANKRD7	Q92527	254 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	ESAM	Q96AP7	390 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	PTCD3	Q96EY7	689 aa	Known RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	RBM18	Q96H35	190 aa	Known RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	FBXL20	Q96IG2	436 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	ART5	Q96L15	291 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	TMEM79	Q9BSE2	394 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	TBCD	Q9BTW9	1192 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	REPIN1	Q9BWE0	567 aa	Known RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	ERVK-6	Q9BXR3	956 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	EHD1	Q9H4M9	534 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	CNOT10	Q9H9A5	744 aa	Known RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	PLAC1	Q9HBJ0	212 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	CNOT11	Q9UKZ1	510 aa	Known RBP	12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	ERVK-19	Q9WJR5	959 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	PSAT1	Q9Y617	370 aa		12.49	□□□□□ -0.41
CTSL-204	ENST00000375894	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
CTSL-204	ENST00000375894	IQANK1	A0A1B0GTG1	560 aa		12.48	□□□□□ -0.41
CTSL-204	ENST00000375894	PGRMC1	O00264	195 aa	Known RBP	12.48	□□□□□ -0.41
CTSL-204	ENST00000375894	SAP18	O00422	153 aa	Known RBP	12.48	□□□□□ -0.41
CTSL-204	ENST00000375894	DNALI1	O14645	258 aa	Predicted RBP	12.48	□□□□□ -0.41
CTSL-204	ENST00000375894	TAPBP	O15533	448 aa		12.48	□□□□□ -0.41
CTSL-204	ENST00000375894	PRAMEF4	O60810	478 aa		12.48	□□□□□ -0.41
CTSL-204	ENST00000375894	ACSL3	O95573	720 aa		12.48	□□□□□ -0.41
CTSL-204	ENST00000375894	C1QA	P02745	245 aa		12.48	□□□□□ -0.41
CTSL-204	ENST00000375894	HRG	P04196	525 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms