RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ACKR4Q9NPB9 350 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 BOKQ9UMX3 212 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-202ENST00000374426 CHCHD2Q9Y6H1 151 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-202ENST00000374426 MPDZO75970 2070 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 ARHGAP21Q5T5U3 1957 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 FBXO45P0C2W1 286 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 TCP1P17987 556 aaKnown RBP12.68□□□□□ -0.38
CXCL12-202ENST00000374426 UQCRC1P31930 480 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 GMPRP36959 345 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 TRPC1P48995 793 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 PLIN5Q00G26 463 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 TBL3Q12788 808 aaKnown RBP12.68□□□□□ -0.38
CXCL12-202ENST00000374426 ILF2Q12905 390 aaKnown RBP12.68□□□□□ -0.38
CXCL12-202ENST00000374426 CBLBQ13191 982 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 SLAMF1Q13291 335 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 KHDRBS2Q5VWX1 349 aaKnown RBP12.68□□□□□ -0.38
CXCL12-202ENST00000374426 CHSY3Q70JA7 882 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 ZBED8Q8IZ13 594 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 RNF175Q8N4F7 328 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 FAM13CQ8NE31 585 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 C7orf57Q8NEG2 295 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 OR7G3Q8NG95 312 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 DOK4Q8TEW6 326 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 EXT2Q93063 718 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 TSPAN17Q96FV3 270 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 RMND5BQ96G75 393 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-202ENST00000374426 RBM18Q96H35 190 aaKnown RBP12.68□□□□□ -0.38
CXCL12-202ENST00000374426 UBXN10Q96LJ8 280 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 KRT12Q99456 494 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 GPR22Q99680 433 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 SH3GL2Q99962 352 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 CD244Q9BZW8 370 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 OR51B5Q9H339 312 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 RPF2Q9H7B2 306 aaKnown RBP12.68□□□□□ -0.38
CXCL12-202ENST00000374426 QPCTLQ9NXS2 382 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 CNIH4Q9P003 139 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 RNF112Q9ULX5 631 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 PLEKHA6Q9Y2H5 1048 aa12.68□□□□□ -0.38
CXCL12-202ENST00000374426 FREM3P0C091 2139 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 A6NNC1 897 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 HSPB2A8KAH6 182 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 KDM4EB2RXH2 506 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-202ENST00000374426 PROM1O43490 865 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 DYRK3O43781 588 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 PRKRAO75569 313 aaKnown RBP12.67□□□□□ -0.38
CXCL12-202ENST00000374426 LRATO95237 230 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 PCNAP12004 261 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 ALOX15P16050 662 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-202ENST00000374426 STMN1P16949 149 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 BMP5P22003 454 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 PEX19P40855 299 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 WNT3P56703 355 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 PPP2R2AP63151 447 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 FOXD4Q12950 439 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-202ENST00000374426 ZKSCAN8Q15776 578 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-202ENST00000374426 HSPB2Q16082 182 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 FLYWCH1Q4VC44 716 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 DEPDC1Q5TB30 811 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 C18orf63Q68DL7 685 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 OR4C11Q6IEV9 310 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 MED27Q6P2C8 311 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 POMZP3Q6PJE2 187 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 LRRC70Q7Z2Q7 622 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 CDC20BQ86Y33 519 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 TNIP2Q8NFZ5 429 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 TANKQ92844 425 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 UBE2E3Q969T4 207 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 CMTM7Q96FZ5 175 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 ART5Q96L15 291 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 JSRP1Q96MG2 331 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-202ENST00000374426 GAL3ST4Q96RP7 486 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 WWTR1Q9GZV5 400 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 DLL4Q9NR61 685 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.67□□□□□ -0.38
CXCL12-202ENST00000374426 MS4A12Q9NXJ0 267 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 CNOT11Q9UKZ1 510 aaKnown RBP12.67□□□□□ -0.38
CXCL12-202ENST00000374426 CBLCQ9ULV8 474 aa12.67□□□□□ -0.38
CXCL12-202ENST00000374426 WASHC1A8K0Z3 465 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 EFCAB8A8MWE9 144 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 PLPP1O14494 284 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 DVL2O14641 736 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 TRIM3O75382 744 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 S100BP04271 92 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 DNASE1P24855 282 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 SERPINB3P29508 390 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 SERPINB1P30740 379 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 SSTR1P30872 391 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 CEACAM8P31997 349 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 RPL21P46778 160 aaKnown RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 ASCL1P50553 236 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 HNRNPH2P55795 449 aaKnown RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 SLC37A1P57057 533 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 HERVK_113P63132 956 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 ERVK-8P63133 956 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 TNFRSF17Q02223 184 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 PCDH1Q08174 1060 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 DUSP8Q13202 625 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 BIKQ13323 160 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 EBPQ15125 230 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms