RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 FMO6PO60774 539 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 MITFO75030 526 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 GATBO75879 557 aaKnown RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 LRG1P02750 347 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 LINC00032P0C843 101 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 FOXA1P55317 472 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 MAXP61244 160 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 PLCL1Q15111 1095 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 PCBP2Q15366 365 aaKnown RBP eCLIP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 RNF212Q495C1 297 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 PAN2Q504Q3 1202 aaKnown RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 RABL3Q5HYI8 236 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 C9orf152Q5JTZ5 239 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 LDLRAP1Q5SW96 308 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 MEDAGQ5VYS4 303 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ZNF385CQ66K41 422 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 RAP1GAP2Q684P5 730 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 TFAP2DQ7Z6R9 452 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 TMEM199Q8N511 208 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 OR5M1Q8NGP8 315 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 BBS10Q8TAM1 723 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 BLOC1S5Q8TDH9 187 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 BPIFB1Q8TDL5 484 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 OTUB2Q96DC9 234 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 NARS2Q96I59 477 aaKnown RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 SHDQ96IW2 340 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 RDH12Q96NR8 316 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 PRRX2Q99811 253 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ADGRE3Q9BY15 652 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ROGDIQ9GZN7 287 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ADAM19Q9H013 955 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 HEBP1Q9NRV9 189 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 NUDT4Q9NZJ9 180 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 GPR55Q9Y2T6 319 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 C9JVG2 144 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 J3QW42 95 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 VPS26AO75436 327 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 UPK1BO75841 260 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 SIX3O95343 332 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 HPRP00739 348 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 IFNA2P01563 188 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ESR1P03372 595 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 NCK1P16333 377 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 RPS3P23396 243 aaKnown RBP eCLIP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ZFP36L2P47974 494 aaKnown RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 SERPINB10P48595 397 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 EPS8Q12929 822 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 GANABQ14697 944 aaKnown RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 CTXN3Q4LDR2 81 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 FAM219BQ5XKK7 198 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ADGRD2Q7Z7M1 963 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 LDB1Q86U70 411 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 RTN4RL1Q86UN2 441 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ZNF280BQ86YH2 543 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ADHFE1Q8IWW8 467 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 RNF113BQ8IZP6 322 aaKnown RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 MFSD4AQ8N468 514 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 RYBPQ8N488 228 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ZNF561Q8N587 486 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 OR56A4Q8NGH8 313 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 HASPINQ8TF76 798 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 BIRC7Q96CA5 298 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 GLT1D1Q96MS3 346 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ZCCHC4Q9H5U6 513 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ELOVL2Q9NXB9 296 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 PISDQ9UG56 409 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 PCTPQ9UKL6 214 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 BTRCQ9Y297 605 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 TP53TG5Q9Y2B4 290 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 PCDHB1Q9Y5F3 818 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 NUBP2Q9Y5Y2 271 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 ARL5AQ9Y689 179 aa7.86□□□□□ -1.15
GARNL3-201ENST00000373386 CIB4A0PJX0 185 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 MEX3AA1L020 520 aaKnown RBP7.85□□□□□ -1.15
GARNL3-201ENST00000373386 DVL2O14641 736 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 SCAMP2O15127 329 aaKnown RBP7.85□□□□□ -1.15
GARNL3-201ENST00000373386 SOX30O94993 753 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 TSPAN12O95859 305 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 THRBP10828 461 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 PTGER3P43115 390 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 GABARAPL2P60520 117 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 EMX2Q04743 252 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 TNK1Q13470 666 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 PIN1Q13526 163 aaPredicted RBP7.85□□□□□ -1.15
GARNL3-201ENST00000373386 DAG1Q14118 895 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 GRK1Q15835 563 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 ATP13A5Q4VNC0 1218 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 GPAT3Q53EU6 434 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 CDC73Q6P1J9 531 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 REC114Q7Z4M0 266 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 SNX29P2Q8IUI4 249 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 MCATQ8IVS2 390 aaKnown RBP7.85□□□□□ -1.15
GARNL3-201ENST00000373386 SPNS2Q8IVW8 549 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 RBFAQ8N0V3 343 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 SVOPLQ8N434 492 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 MEIOBQ8N635 442 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 OR2L3Q8NG85 312 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 WFIKKN2Q8TEU8 576 aa7.85□□□□□ -1.15
GARNL3-201ENST00000373386 KIAA1143Q96AT1 154 aaPredicted RBP7.85□□□□□ -1.15
GARNL3-201ENST00000373386 ISG20Q96AZ6 181 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms