RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 TEDDM1Q5T9Z0 273 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 FNDC7Q5VTL7 733 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 PLXDC2Q6UX71 529 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 TMEM64Q6YI46 380 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 TTLQ8NG68 377 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 MBD3L2Q8NHZ7 208 aaPredicted RBP14.09□□□□□ -0.15
SSR4-204ENST00000370087 HSPBAP1Q96EW2 488 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 EGFL8Q99944 293 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 TMEM79Q9BSE2 394 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 DOHHQ9BU89 302 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 NT5DC2Q9H857 520 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 LYRM4Q9HD34 91 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 GALNT8Q9NY28 637 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 OARD1Q9Y530 152 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 SH3D21A4FU49 640 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 SYNDIG1LA6NDD5 238 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 CD8B2A6NJW9 211 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 H2AFYO75367 372 aaKnown RBP14.08□□□□□ -0.16
SSR4-204ENST00000370087 PRKRAO75569 313 aaKnown RBP14.08□□□□□ -0.16
SSR4-204ENST00000370087 GOSR1O95249 250 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 ACSL3O95573 720 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 CLPSP04118 112 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 ATP5A1P25705 553 aaKnown RBP14.08□□□□□ -0.16
SSR4-204ENST00000370087 SLCO1A2P46721 670 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 STT3AP46977 705 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 CDK9P50750 372 aaKnown RBP14.08□□□□□ -0.16
SSR4-204ENST00000370087 CDKL1Q00532 357 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 TSNQ15631 228 aaKnown RBP14.08□□□□□ -0.16
SSR4-204ENST00000370087 VASNQ6EMK4 673 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 FAM45BPQ6NSW5 357 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 TRMT10BQ6PF06 316 aaKnown RBP14.08□□□□□ -0.16
SSR4-204ENST00000370087 GALNT7Q86SF2 657 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 P3H2Q8IVL5 708 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 FAM45AQ8TCE6 357 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 ANKRD49Q8WVL7 239 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 RHBDF1Q96CC6 855 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 CERS2Q96G23 380 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 WDYHV1Q96HA8 205 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 ZNF597Q96LX8 424 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 GAL3ST4Q96RP7 486 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 SORBS1Q9BX66 1292 aaKnown RBP14.08□□□□□ -0.16
SSR4-204ENST00000370087 UGT2B28Q9BY64 529 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 UBQLN3Q9H347 655 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 CNIH4Q9P003 139 aa14.08□□□□□ -0.16
SSR4-204ENST00000370087 ARID1AO14497 2285 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 ATRQ13535 2644 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 ANKDD1BA6NHY2 528 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 NCF1BA6NI72 391 aaPredicted RBP14.07□□□□□ -0.16
SSR4-204ENST00000370087 NCF1CA8MVU1 366 aaPredicted RBP14.07□□□□□ -0.16
SSR4-204ENST00000370087 TAPBPO15533 448 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 ARHGEF9O43307 516 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 ZSCAN12O43309 604 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 SH3BGRLO75368 114 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 TRAPPC6AO75865 159 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 HPNP05981 417 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 NCF1P14598 390 aaPredicted RBP14.07□□□□□ -0.16
SSR4-204ENST00000370087 BMP7P18075 431 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 GSTM2P28161 218 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 MSH2P43246 934 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 NTRK2Q16620 822 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 EIPR1Q53HC9 387 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 SPANXN3Q5MJ09 141 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 RNASEH2BQ5TBB1 312 aaKnown RBP14.07□□□□□ -0.16
SSR4-204ENST00000370087 ZNF662Q6ZS27 426 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 YTHDF3Q7Z739 585 aaKnown RBP14.07□□□□□ -0.16
SSR4-204ENST00000370087 LUZP2Q86TE4 346 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 MED12LQ86YW9 2145 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 KRT78Q8N1N4 520 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 SLC15A4Q8N697 577 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 ACOT4Q8N9L9 421 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 SMPDL3BQ92485 455 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 MAGOHBQ96A72 148 aaKnown RBP14.07□□□□□ -0.16
SSR4-204ENST00000370087 ESAMQ96AP7 390 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 FBXL20Q96IG2 436 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 MS4A14Q96JA4 679 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 DACH2Q96NX9 599 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 DGAT2Q96PD7 388 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 RBM24Q9BX46 236 aaKnown RBP14.07□□□□□ -0.16
SSR4-204ENST00000370087 WWTR1Q9GZV5 400 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 C6orf203Q9P0P8 240 aaPredicted RBP14.07□□□□□ -0.16
SSR4-204ENST00000370087 TRPS1Q9UHF7 1281 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 PSAT1Q9Y617 370 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 MXRA5Q9NR99 2828 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 STAB1Q9NY15 2570 aa14.07□□□□□ -0.16
SSR4-204ENST00000370087 SMPD2O60906 423 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 IL18BPO95998 194 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 TMIGD3P0DMS9 266 aaPredicted RBP14.06□□□□□ -0.16
SSR4-204ENST00000370087 EPORP19235 508 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 OPRM1P35372 400 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 KCNC1P48547 511 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 HNMTP50135 292 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 FBXW4P57775 412 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 HERVK_113P63132 956 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 ERVK-8P63133 956 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 DOC2AQ14183 400 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 RCN2Q14257 317 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 EBPQ15125 230 aaKnown RBP14.06□□□□□ -0.16
SSR4-204ENST00000370087 WIPI1Q5MNZ9 446 aaPredicted RBP14.06□□□□□ -0.16
SSR4-204ENST00000370087 HP1BP3Q5SSJ5 553 aaPredicted RBP14.06□□□□□ -0.16
SSR4-204ENST00000370087 PM20D2Q8IYS1 436 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms