RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RBM18Q96H35 190 aaKnown RBP13.01□□□□□ -0.33
TPM3-211ENST00000368531 VPS50Q96JG6 964 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 CATSPER2Q96P56 530 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 IP6K3Q96PC2 410 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 LPAR4Q99677 370 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 TMEM120AQ9BXJ8 343 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 DPY30Q9C005 99 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 ZNF700Q9H0M5 742 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 REEP4Q9H6H4 257 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 KCNK13Q9HB14 408 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 WBP11Q9Y2W2 641 aaKnown RBP13.01□□□□□ -0.33
TPM3-211ENST00000368531 GABRR3A8MPY1 467 aa13□□□□□ -0.33
TPM3-211ENST00000368531 UBDO15205 165 aa13□□□□□ -0.33
TPM3-211ENST00000368531 CELA2AP08217 269 aa13□□□□□ -0.33
TPM3-211ENST00000368531 COX7A2P14406 83 aa13□□□□□ -0.33
TPM3-211ENST00000368531 PORP16435 677 aaPredicted RBP13□□□□□ -0.33
TPM3-211ENST00000368531 EFNA1P20827 205 aaPredicted RBP13□□□□□ -0.33
TPM3-211ENST00000368531 NT5EP21589 574 aa13□□□□□ -0.33
TPM3-211ENST00000368531 HPCAL1P37235 193 aa13□□□□□ -0.33
TPM3-211ENST00000368531 PGDP52209 483 aa13□□□□□ -0.33
TPM3-211ENST00000368531 CLDN8P56748 225 aa13□□□□□ -0.33
TPM3-211ENST00000368531 PLIN5Q00G26 463 aa13□□□□□ -0.33
TPM3-211ENST00000368531 DUSP2Q05923 314 aa13□□□□□ -0.33
TPM3-211ENST00000368531 COL28A1Q2UY09 1125 aa13□□□□□ -0.33
TPM3-211ENST00000368531 BTBD16Q32M84 506 aa13□□□□□ -0.33
TPM3-211ENST00000368531 PGS1Q32NB8 556 aa13□□□□□ -0.33
TPM3-211ENST00000368531 CRTC2Q53ET0 693 aaPredicted RBP13□□□□□ -0.33
TPM3-211ENST00000368531 ZNF385BQ569K4 471 aa13□□□□□ -0.33
TPM3-211ENST00000368531 DGAT2L6Q6ZPD8 337 aa13□□□□□ -0.33
TPM3-211ENST00000368531 IKBIPQ70UQ0 350 aa13□□□□□ -0.33
TPM3-211ENST00000368531 NDUFAF7Q7L592 441 aa13□□□□□ -0.33
TPM3-211ENST00000368531 CCDC116Q8IYX3 515 aa13□□□□□ -0.33
TPM3-211ENST00000368531 OR7A2PQ8NGA2 310 aa13□□□□□ -0.33
TPM3-211ENST00000368531 CNRIP1Q96F85 164 aaPredicted RBP13□□□□□ -0.33
TPM3-211ENST00000368531 FER1L6-AS2Q96M78 137 aa13□□□□□ -0.33
TPM3-211ENST00000368531 BBS4Q96RK4 519 aa13□□□□□ -0.33
TPM3-211ENST00000368531 WDR77Q9BQA1 342 aaPredicted RBP13□□□□□ -0.33
TPM3-211ENST00000368531 CCDC28BQ9BUN5 200 aa13□□□□□ -0.33
TPM3-211ENST00000368531 ADAP2Q9NPF8 381 aa13□□□□□ -0.33
TPM3-211ENST00000368531 SLC35C2Q9NQQ7 365 aa13□□□□□ -0.33
TPM3-211ENST00000368531 GIMAP4Q9NUV9 329 aa13□□□□□ -0.33
TPM3-211ENST00000368531 AIG1Q9NVV5 245 aa13□□□□□ -0.33
TPM3-211ENST00000368531 ASIC5Q9NY37 505 aa13□□□□□ -0.33
TPM3-211ENST00000368531 ENTPD4Q9Y227 616 aa13□□□□□ -0.33
TPM3-211ENST00000368531 CLCA3PQ9Y6N3 262 aa13□□□□□ -0.33
TPM3-211ENST00000368531 GMNCA6NCL1 334 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 A6NL46 340 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 C17orf105B2RV13 164 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 C9JVG2 144 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 PCDH17O14917 1159 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 SCAMP2O15127 329 aaKnown RBP12.99□□□□□ -0.33
TPM3-211ENST00000368531 DNAJB5O75953 348 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 HPP00738 406 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 CPMP14384 443 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 CSNK2A2P19784 350 aaPredicted RBP12.99□□□□□ -0.33
TPM3-211ENST00000368531 NCF2P19878 526 aaPredicted RBP12.99□□□□□ -0.33
TPM3-211ENST00000368531 PRPS1L1P21108 318 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 STT3AP46977 705 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 CCL11P51671 97 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 ARFIP2P53365 341 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 UFM1P61960 85 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 IGLV3-21P80748 117 aaPredicted RBP12.99□□□□□ -0.33
TPM3-211ENST00000368531 DCAF10Q5QP82 559 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 R3HCC1LQ7Z5L2 792 aaKnown RBP12.99□□□□□ -0.33
TPM3-211ENST00000368531 CPLX4Q7Z7G2 160 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 ADCY4Q8NFM4 1077 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 CIDECQ96AQ7 238 aaPredicted RBP12.99□□□□□ -0.33
TPM3-211ENST00000368531 NACC2Q96BF6 587 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 ELAC2Q9BQ52 826 aaKnown RBP12.99□□□□□ -0.33
TPM3-211ENST00000368531 CNPPD1Q9BV87 410 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 BRINP2Q9C0B6 783 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 ING2Q9H160 280 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 EHD3Q9NZN3 535 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 GPR45Q9Y5Y3 372 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 KCNMB2Q9Y691 235 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 FRYQ5TBA9 3013 aa12.99□□□□□ -0.33
TPM3-211ENST00000368531 MED13Q9UHV7 2174 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 SAGE2PA6NJ88 616 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 SLC35E2P0CK97 266 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 LAMP1P11279 417 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 IDO1P14902 403 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 RRADP55042 308 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 SLC26A5P58743 744 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 Q0VFX4 171 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 BIKQ13323 160 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 RAPSNQ13702 412 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 ZNF267Q14586 743 aaPredicted RBP12.98□□□□□ -0.33
TPM3-211ENST00000368531 ELAVL1Q15717 326 aaKnown RBP12.98□□□□□ -0.33
TPM3-211ENST00000368531 LTB4RQ15722 352 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 CPTPQ5TA50 214 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 FAM111BQ6SJ93 734 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 GPR155Q7Z3F1 870 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 ST13P4Q8IZP2 240 aaPredicted RBP12.98□□□□□ -0.33
TPM3-211ENST00000368531 LRRC25Q8N386 305 aaPredicted RBP12.98□□□□□ -0.33
TPM3-211ENST00000368531 TMEM102Q8N9M5 508 aaPredicted RBP12.98□□□□□ -0.33
TPM3-211ENST00000368531 CLEC1AQ8NC01 280 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 PTPMT1Q8WUK0 201 aaPredicted RBP12.98□□□□□ -0.33
TPM3-211ENST00000368531 EXTL1Q92935 676 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 RIT1Q92963 219 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 THOC3Q96J01 351 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms