RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 TCTE1Q5JU00 501 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 PRAMEF17Q5VTA0 474 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 C10orf67Q8IYJ2 551 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 NATD1Q8N6N6 113 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 VPS37AQ8NEZ2 397 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 OR10A6Q8NH74 314 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 CNDP2Q96KP4 475 aaKnown RBP8.94□□□□□ -0.98
VTA1-201ENST00000367621 CCDC74BQ96LY2 380 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 GBP5Q96PP8 586 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 THUMPD3Q9BV44 507 aaKnown RBP8.94□□□□□ -0.98
VTA1-201ENST00000367621 PIF1Q9H611 641 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 TPT1P8Q9HAU6 139 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 PARD6AQ9NPB6 346 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 SIDT1Q9NXL6 827 aaKnown RBP8.94□□□□□ -0.98
VTA1-201ENST00000367621 TAS2R9Q9NYW1 312 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 PHF11Q9UIL8 331 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 UTS2RQ9UKP6 389 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 VPS4AQ9UN37 437 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 CLDN16Q9Y5I7 305 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 FRYLO94915 3013 aa8.94□□□□□ -0.98
VTA1-201ENST00000367621 ASXL3Q9C0F0 2248 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 WDR87Q6ZQQ6 2873 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 TCRBV5S2A0A599 114 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 TCRBV3S1A0A5B6 114 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 TMEM150CB9EJG8 249 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 H3BNX3 289 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 ARPC2O15144 300 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 FLRT2O43155 660 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 KCNK5O95279 499 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 C8BP07358 591 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 ABCB1P08183 1280 aaPredicted RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 C8orf89P0DMQ9 161 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 ZNF10P21506 573 aaPredicted RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 UQCRC2P22695 453 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 CPN2P22792 545 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 FEN1P39748 380 aaKnown RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 ATXN3P54252 364 aaPredicted RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 RAB38P57729 211 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 SIM1P81133 766 aaPredicted RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 DAB2P98082 770 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 MAT1AQ00266 395 aaKnown RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 ZFP36L1Q07352 338 aaKnown RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 BNIP2Q12982 314 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 FLOT2Q14254 428 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 GRM7Q14831 915 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 C16orf72Q14CZ0 275 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 COX20Q5RI15 118 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 LCN8Q6JVE9 175 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 RNF111Q6ZNA4 994 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 MED25Q71SY5 747 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 B3GNT8Q7Z7M8 397 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 PTOV1Q86YD1 416 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 ZZZ3Q8IYH5 903 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 ENDOVQ8N8Q3 282 aaKnown RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 RCBTB1Q8NDN9 531 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 RHBDD1Q8TEB9 315 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 ATOH1Q92858 354 aaPredicted RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 ANKRD9Q96BM1 317 aaPredicted RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 SH3GL1Q99961 368 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 DPYSL5Q9BPU6 564 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 KCTD14Q9BQ13 255 aaPredicted RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 ASPSCR1Q9BZE9 553 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 RPF2Q9H7B2 306 aaKnown RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 CLK4Q9HAZ1 481 aaKnown RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 ANKHQ9HCJ1 492 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 CUTCQ9NTM9 273 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 MS4A12Q9NXJ0 267 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 ACTR3BQ9P1U1 418 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 ZNF282Q9UDV7 671 aaPredicted RBP8.93□□□□□ -0.98
VTA1-201ENST00000367621 EGFL7Q9UHF1 273 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 ACSL6Q9UKU0 697 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 AP3M1Q9Y2T2 418 aa8.93□□□□□ -0.98
VTA1-201ENST00000367621 PI4KAP42356 2102 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 FAM220BPB1ANY3 271 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 D6RAR5 112 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 TGFBR3LH3BV60 316 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 FGF17O60258 216 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 TNFRSF21O75509 655 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 ERAL1O75616 437 aaKnown RBP8.92□□□□□ -0.98
VTA1-201ENST00000367621 OR2B3O76000 313 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 PSMG1O95456 288 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 ANP32DO95626 131 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 GP1BAP07359 652 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 NCK1P16333 377 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 DDX5P17844 614 aaKnown RBP8.92□□□□□ -0.98
VTA1-201ENST00000367621 GGT1P19440 569 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 CSNK2A2P19784 350 aaPredicted RBP8.92□□□□□ -0.98
VTA1-201ENST00000367621 PTGER1P34995 402 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 BUD31P41223 144 aaPredicted RBP8.92□□□□□ -0.98
VTA1-201ENST00000367621 ARL4DP49703 201 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 NCBP2P52298 156 aaKnown RBP eCLIP8.92□□□□□ -0.985e-11■□□□□ 9
VTA1-201ENST00000367621 MANFP55145 182 aaKnown RBP8.92□□□□□ -0.98
VTA1-201ENST00000367621 SHC2P98077 582 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 ABHD18Q0P651 414 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 MGAT2Q10469 447 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 RGNQ15493 299 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 NDUFA9Q16795 377 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 SYT16Q17RD7 645 aa8.92□□□□□ -0.98
VTA1-201ENST00000367621 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms