RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TTYH2Q9BSA4 534 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 CSNK1G1Q9HCP0 422 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 ENPP4Q9Y6X5 453 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 KIAA0355O15063 1070 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 HOXB2P14652 356 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 MAT2AP31153 395 aaKnown RBP11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 CRISP1P54107 249 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 NFATC3Q12968 1075 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 GRB7Q14451 532 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 RAB41Q5JT25 222 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 Q6ZVL8 140 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 TCEAL8Q8IYN2 117 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 C17orf62Q9BQA9 187 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 MROQ9BYG7 248 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 CHMP1AQ9HD42 196 aaPredicted RBP11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 ENTPD1P49961 510 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 LMAN2Q12907 356 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 OLIG2Q13516 323 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 GBX1Q14549 363 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 ZNF627Q7L945 461 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 SLC22A15Q8IZD6 547 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 DCAF13Q9NV06 445 aaKnown RBP11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 SPTA1P02549 2419 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 C5orf51A6NDU8 294 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 RAB33AQ14088 237 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 HSD17B12Q53GQ0 312 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 ORAI3Q9BRQ5 295 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 SLC6A16Q9GZN6 736 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZFP57Q9NU63 452 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 TCRBV3S1A0A5B6 114 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 DBIP07108 87 aaKnown RBP11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 NDUFV2P19404 249 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 LRP8Q14114 963 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 SAMD12Q8N8I0 201 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 TFAP2CQ92754 450 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 DAZLQ92904 295 aaKnown RBP11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 HSPBAP1Q96EW2 488 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 HERPUD2Q9BSE4 406 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 TP53I11O14683 189 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 PRKCGP05129 697 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 PON2Q15165 354 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 PNCKQ6P2M8 343 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 RAD9AQ99638 391 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF717Q9BY31 904 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 ASB6Q9NWX5 421 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 KLK3P07288 261 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 MAGEA3P43357 314 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 CTBP2P56545 445 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 LDLRAD1Q5T700 205 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 GPAT4Q86UL3 456 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 KRTCAP2Q8N6L1 136 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 FAM110BQ8TC76 370 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 WDR92Q96MX6 357 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 DPYSL5Q9BPU6 564 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 WDR45BQ5MNZ6 344 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 CCDC54Q8NEL0 328 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 HMGB4Q8WW32 186 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 INPP5EQ9NRR6 644 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 GDI1P31150 447 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR4D1Q15615 310 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 HACD4Q5VWC8 232 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 C6orf120Q7Z4R8 191 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 UBE2Q1Q7Z7E8 422 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 NLGN2Q8NFZ4 835 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 ELP5Q8TE02 316 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 IGSF8Q969P0 613 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 NECTIN4Q96NY8 510 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 VRK1Q99986 396 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 ABCG2Q9UNQ0 655 aa11.52□□□□□ -0.57
CDC42BPA-203ENST00000366766 CLCA1A8K7I4 914 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 HNRNPA0Q13151 305 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 C3P1Q6ZMU1 363 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 ARNTL2Q8WYA1 636 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 PREBQ9HCU5 417 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 C12orf4Q9NQ89 552 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 CNOT2Q9NZN8 540 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 SPTBP11277 2137 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 ATG2BQ96BY7 2078 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 BEST1O76090 585 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 KDM4BO94953 1096 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 C5AR1P21730 350 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 MTNR1AP48039 350 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 PREPP48147 710 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 MAD2L1BPQ15013 274 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF613Q6PF04 617 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 XKR5Q6UX68 686 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 WASP42768 502 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 DOC2AQ14183 400 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 ELOCQ15369 112 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 ULK3Q6PHR2 472 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF598Q86UK7 904 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 FBRSL1Q9HCM7 1045 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 PTGESO14684 152 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 MTX2O75431 263 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 C2orf27AQ580R0 203 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 GALNTL5Q7Z4T8 443 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 A0A1B0GVI7 797 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 J3QLW9 94 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 AURKAO14965 403 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 EDN1P05305 212 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms