RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ZNF624Q9P2J8 865 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 PCDHGA8Q9Y5G5 932 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 COLEC10Q9Y6Z7 277 aa13.16□□□□□ -0.3
CSNK1E-201ENST00000359867 GOLGA4Q13439 2230 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 C1orf226A1L170 272 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 A6NCN8 305 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 B4DGG1 531 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 H7BY64 318 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 SAP18O00422 153 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 KCNK5O95279 499 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 ALPLP05186 524 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 F3P13726 295 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 PRKACGP22612 351 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 ALDH3A2P51648 485 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 PLA2G16P53816 162 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.32e-8■□□□□ 10.4
CSNK1E-201ENST00000359867 ABATP80404 500 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 AQP6Q13520 282 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 VMACQ2NL98 169 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 ZNF551Q7Z340 670 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 IGFN1Q86VF2 1251 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 ANKRD53Q8N9V6 530 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 TTLQ8NG68 377 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 OR10Q1Q8NGQ4 319 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 PRAP1Q96NZ9 151 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 KLHL25Q9H0H3 589 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 AP1M2Q9Y6Q5 423 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 PTGES3LE9PB15 166 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 SEC14L2O76054 403 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 PSMB5P28074 263 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 NDUFS1P28331 727 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 TAS2R50P59544 299 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 CSNK1G2P78368 415 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 SLC14A1Q13336 389 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 VEZF1Q14119 521 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 CTU2Q2VPK5 515 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 DEFB133Q30KQ1 61 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 ZNF385BQ569K4 471 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 PEAR1Q5VY43 1037 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 TCEAL6Q6IPX3 200 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 ZCCHC8Q6NZY4 707 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 ZZZ3Q8IYH5 903 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 SLC38A6Q8IZM9 456 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 NATD1Q8N6N6 113 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 OR7G1Q8NGA0 311 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 OR52E1Q8NGJ3 308 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 OR2A1Q8NGT9 310 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 ZFP90Q8TF47 636 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 TCEAL3Q969E4 200 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 EFHD2Q96C19 240 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 CCDC90BQ9GZT6 254 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 ARRDC1-AS1Q9H2J1 176 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 KIR3DX1Q9H7L2 352 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 IL21RQ9HBE5 538 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 DNAJB9Q9UBS3 223 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 AASSQ9UDR5 926 aa13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 SAMD4AQ9UPU9 718 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-201ENST00000359867 TBX19O60806 448 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 ABCB7O75027 752 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 PIAS2O75928 621 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 PRKD3O94806 890 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 TBX6O95947 436 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 SERPINA1P01009 418 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 HTR1AP08908 422 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 DDX5P17844 614 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 CRHBPP24387 322 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 GSTM2P28161 218 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 OPRL1P41146 370 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC19A1P41440 591 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 RGS21Q2M5E4 152 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 THAP5Q7Z6K1 395 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 C8orf59Q8N0T1 100 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 SPARTQ8N0X7 666 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 NAGSQ8N159 534 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 OR4A15Q8NGL6 344 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 PYURFQ96I23 114 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 ELF4Q99607 663 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 SPASTQ9UBP0 616 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 ADAM29Q9UKF5 820 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 PCOLCE2Q9UKZ9 415 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 TRBC2A0A5B9 178 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 H0YAE9 185 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 PLPP1O14494 284 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 PRICKLE3O43900 615 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 CLEC3AO75596 197 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 CLPXO76031 633 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 GBAP04062 536 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 ALDH4A1P30038 563 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 TMBIM6P55061 237 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 ELOCQ15369 112 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 SHBQ15464 509 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 PERM1Q5SV97 790 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 SIGIRRQ6IA17 410 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 SPESP1Q6UW49 350 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 FUNDC2Q9BWH2 189 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 AMBRA1Q9C0C7 1298 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 RAD21L1Q9H4I0 556 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 XKR8Q9H6D3 395 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms