RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 ELP5Q8TE02 316 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 RSC1A1Q92681 617 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 MARC2Q969Z3 335 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 FCRL2Q96LA5 508 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 ZBTB18Q99592 522 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 SSX3Q99909 188 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 ACBD6Q9BR61 282 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 OR51E2Q9H255 320 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 MYNNQ9NPC7 610 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 ABCB10Q9NRK6 738 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 CATSPERZQ9NTU4 200 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 ABCB8Q9NUT2 735 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 GDE1Q9NZC3 331 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 NDRG2Q9UN36 371 aaKnown RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 KCTD3Q9Y597 815 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 C9orf170A2RU37 121 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 PRAMEF25A6NGN4 478 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 UNC119BA6NIH7 251 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 ARVCFO00192 962 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 SCAMP2O15127 329 aaKnown RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 HUS1O60921 280 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 APOC1P02654 83 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 DARSP14868 501 aaKnown RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 TGM4P49221 684 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 GTF2A2P52657 109 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 CRISP1P54107 249 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 CDC42P60953 191 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 RAB4BP61018 213 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 POLR2GP62487 172 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 TRA2BP62995 288 aaKnown RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 DEFB115Q30KQ5 88 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 SYTL3Q4VX76 610 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 SUSD1Q6UWL2 747 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 TMEM64Q6YI46 380 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 ARMCX2Q7L311 632 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 GPR142Q7Z601 462 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 PTAR1Q7Z6K3 402 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 METTL3Q86U44 580 aaKnown RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 COMMD7Q86VX2 200 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 MIB1Q86YT6 1006 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 RNF148Q8N7C7 305 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 CLHC1Q8NHS4 586 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 TRMT61AQ96FX7 289 aaKnown RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 SMARCD1Q96GM5 515 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 TMEM175Q9BSA9 504 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 TSEN34Q9BSV6 310 aaKnown RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 ZNF416Q9BWM5 594 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 CEP41Q9BYV8 373 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 ADNPQ9H2P0 1102 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 EPHX3Q9H6B9 360 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 REEP1Q9H902 201 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 TCF7L1Q9HCS4 588 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 BABAM2Q9NXR7 383 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 SLC2A8Q9NY64 477 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 SLAMF8Q9P0V8 285 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 EGFL7Q9UHF1 273 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 ZNF490Q9ULM2 529 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-201ENST00000359785 MAFFQ9ULX9 164 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 MGAT4AQ9UM21 535 aa4.29□□□□□ -1.72
PTPN22-201ENST00000359785 TMEM150BA6NC51 233 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 RRN3P2A6NIE6 340 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 FAM157AC9JC47 383 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 H7C417 338 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 BTN3A1O00481 513 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 AP3D1O14617 1153 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 GPR171O14626 319 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 CHST10O43529 356 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 EFCAB14O75071 495 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 PSIP1O75475 530 aaKnown RBP4.28□□□□□ -1.72
PTPN22-201ENST00000359785 IGHV2-70P01814 119 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 UBBP0CG47 229 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 UBCP0CG48 685 aaKnown RBP4.28□□□□□ -1.72
PTPN22-201ENST00000359785 CYP4B1P13584 511 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 GLULP15104 373 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 ARF4P18085 180 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-201ENST00000359785 BRCC3P46736 316 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 PPM1FP49593 454 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-201ENST00000359785 TAS2R43P59537 309 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 RPS27AP62979 156 aaKnown RBP4.28□□□□□ -1.72
PTPN22-201ENST00000359785 UBA52P62987 128 aaKnown RBP4.28□□□□□ -1.72
PTPN22-201ENST00000359785 PITPNAQ00169 270 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 ARHGAP1Q07960 439 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 GAS6Q14393 721 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 SPHARQ15513 63 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 FBXO47Q5MNV8 452 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 SPRYD7Q5W111 196 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 CLEC6AQ6EIG7 209 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 GRHL2Q6ISB3 625 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 KLHL17Q6TDP4 642 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 CD300LGQ6UXG3 332 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 TMPRSS11FQ6ZWK6 438 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 OVCH1Q7RTY7 1134 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 PID1Q7Z2X4 250 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 DEFB132Q7Z7B7 95 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 KLBQ86Z14 1044 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 MORN4Q8NDC4 146 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 SFXN5Q8TD22 340 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 C2orf15Q8WU43 125 aaKnown RBP4.28□□□□□ -1.72
PTPN22-201ENST00000359785 SMIM4Q8WVI0 70 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 MRPS24Q96EL2 167 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms