RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 SPEF1Q9Y4P9 236 aa4.83□□□□□ -1.64
ATXN3-202ENST00000359366 AP4B1Q9Y6B7 739 aa4.83□□□□□ -1.64
ATXN3-202ENST00000359366 EML5Q05BV3 1969 aa4.83□□□□□ -1.64
ATXN3-202ENST00000359366 THADAQ6YHU6 1953 aa4.83□□□□□ -1.64
ATXN3-202ENST00000359366 C15orf38-AP3S2A0A0A6YYH1 394 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 C1orf226A1L170 272 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 LRIT2A6NDA9 550 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 NPIPB8E9PQR5 432 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 hCG_2039718K7EN88 272 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ZW10O43264 779 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 PRICKLE3O43900 615 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ERAL1O75616 437 aaKnown RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 KCNK5O95279 499 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 NPPAP01160 153 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 HMGN1P05114 100 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 F3P13726 295 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 CTSEP14091 401 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 UQCRBP14927 111 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 UGT2B7P16662 529 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF23P17027 643 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 JUNDP17535 347 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 FASP25445 335 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ASMTP46597 345 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 CSNK1EP49674 416 aaKnown RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 POLR2GP62487 172 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ID2Q02363 134 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 RPL6Q02878 288 aaKnown RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 SRSF11Q05519 484 aaKnown RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 DUSP2Q05923 314 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 C19orf57Q0VDD7 668 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 SLC5A12Q1EHB4 618 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 LEXMQ3ZCV2 418 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 C18orf63Q68DL7 685 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 FRMPD2BQ6IN97 320 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 TNFAIP8L2Q6P589 184 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 GALNT18Q6P9A2 607 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 IYDQ6PHW0 289 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ABRAXAS1Q6UWZ7 409 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ZBTB49Q6ZSB9 765 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 WDR53Q7Z5U6 358 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ARPINQ7Z6K5 226 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ABI3BPQ7Z7G0 1075 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 TMEM179BQ7Z7N9 219 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 RNF130Q86XS8 419 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ZZZ3Q8IYH5 903 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 RAB42Q8N4Z0 105 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 NATD1Q8N6N6 113 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 TRPV3Q8NET8 790 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 OR10Z1Q8NGY1 313 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 GIPC3Q8TF64 312 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 RSC1A1Q92681 617 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 SLC47A1Q96FL8 570 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 REXO5Q96IC2 774 aaKnown RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 TPD52L3Q96J77 140 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 MAGEB10Q96LZ2 347 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 HSPA12BQ96MM6 686 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 OR2A14Q96R47 310 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 NEURL2Q9BR09 285 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 YIPF4Q9BSR8 244 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 CXorf36Q9H7Y0 433 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 TBC1D17Q9HA65 648 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 PELI2Q9HAT8 420 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 FSCN3Q9NQT6 498 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 TAS2R7Q9NYW3 318 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 CPNE7Q9UBL6 633 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 MAGEL2Q9UJ55 1249 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 MRPS2Q9Y399 296 aaKnown RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ATG4BQ9Y4P1 393 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 COLEC10Q9Y6Z7 277 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ASCC3Q8N3C0 2202 aaKnown RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 SPTY2D1-AS1A0A0U1RR47 76 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 RNF103-CHMP3A0A140T963 221 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 A0A1W2PPC4 97 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 EVPLLA8MZ36 301 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 MAN2B1O00754 1011 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 EI24O14681 340 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 NOBOXO60393 691 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 B4GALT2O60909 372 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 NDUFS2O75306 463 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 VIPP01282 170 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 TNFP01375 233 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 OCM2P0CE71 109 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 OCMP0CE72 109 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF888P0CJ79 500 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 IL1RNP18510 177 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 PTGS2P35354 604 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 CHI3L1P36222 383 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 YAP1P46937 504 aaKnown RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 RABIFP47224 123 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 CDK9P50750 372 aaKnown RBP4.82□□□□□ -1.64
ATXN3-202ENST00000359366 CRYBA2P53672 197 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 NUP107P57740 925 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 GNG2P59768 71 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 BPIFB3P59826 476 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 BTN3A2P78410 334 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 VAC14Q08AM6 782 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 SLAMF1Q13291 335 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 PDK3Q15120 406 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 ZIC1Q15915 447 aa4.82□□□□□ -1.64
ATXN3-202ENST00000359366 DEFB133Q30KQ1 61 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms