RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 POU2F3Q9UKI9 436 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 ICKQ9UPZ9 632 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 PARP4Q9UKK3 1724 aaKnown RBP17.62■□□□□ 0.41
SHANK1-202ENST00000359082 A0A1W2PP55 124 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 RBBP9O75884 186 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 S100PP25815 95 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 LSSP48449 732 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 ARSFP54793 590 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 DIO3P55073 304 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 RPS21P63220 83 aaKnown RBP17.62■□□□□ 0.41
SHANK1-202ENST00000359082 ELOAQ14241 798 aaKnown RBP17.62■□□□□ 0.41
SHANK1-202ENST00000359082 RBM39Q14498 530 aaKnown RBP17.62■□□□□ 0.41
SHANK1-202ENST00000359082 FAM69BQ5VUD6 431 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 C22orf42Q6IC83 251 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 Q6ZVL8 140 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 ERN2Q76MJ5 926 aaKnown RBP17.62■□□□□ 0.41
SHANK1-202ENST00000359082 TMPRSS12Q86WS5 348 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 PROKR1Q8TCW9 393 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 MROQ9BYG7 248 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 ACSL5Q9ULC5 683 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 A0A1W2PPW3 197 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 FOXK1P85037 733 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 TRAM1Q15629 374 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 LRFN4Q6PJG9 635 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 PLEKHG7Q6ZR37 379 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 MUS81Q96NY9 551 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 OR2M4Q96R27 311 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 TUBA1CQ9BQE3 449 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 TP53I11O14683 189 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 PPM1BO75688 479 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 TUBB3Q13509 450 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 RNF111Q6ZNA4 994 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 LHFPL3Q86UP9 236 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 OR5T1Q8NG75 326 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 HSD3B7Q9H2F3 369 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 RANBP3Q9H6Z4 567 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-202ENST00000359082 TMPRSS11EQ9UL52 423 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 A0A096LPI6 279 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 CIB4A0PJX0 185 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 A6NCN8 305 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 TVP23AA6NH52 213 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 A6NLC8 198 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 NFE2L1Q14494 772 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 PLEKHN1Q494U1 663 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF100Q8IYN0 542 aa17.62■□□□□ 0.41
SHANK1-202ENST00000359082 A0A1B0GV50 99 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 DFNA5O60443 496 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 CD1DP15813 335 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF14P17017 642 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-202ENST00000359082 HK3P52790 923 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 SLC36A3Q495N2 470 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 FAM83CQ9BQN1 747 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 OR2S2Q9NQN1 319 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 RXFP3Q9NSD7 469 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 ANKRD26Q9UPS8 1709 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 GJB5O95377 273 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 TFPTP0C1Z6 253 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 C1GALT1C1LP0DN25 315 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 KCNE1P15382 129 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 KCNC1P48547 511 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 CDCA2Q69YH5 1023 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-202ENST00000359082 SLC27A4Q6P1M0 643 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 SLC16A9Q7RTY1 509 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 DOHHQ9BU89 302 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF451Q9Y4E5 1061 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 RNGTTO60942 597 aaKnown RBP17.61■□□□□ 0.41
SHANK1-202ENST00000359082 FGF3P11487 239 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-202ENST00000359082 HSD11B2P80365 405 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 LMAN2Q12907 356 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 PCDHGA2Q9Y5H1 932 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 ADORA3P0DMS8 318 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 HSD3B1P14060 373 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 RPS26P62854 115 aaKnown RBP17.61■□□□□ 0.41
SHANK1-202ENST00000359082 C1orf61Q13536 156 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 ZDHHC1Q8WTX9 485 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 THRSPQ92748 146 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 DPH2Q9BQC3 489 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-202ENST00000359082 MGAT4CQ9UBM8 478 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 PAK4O96013 591 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF182P17025 639 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-202ENST00000359082 KCNC4Q03721 635 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 GPR17Q13304 367 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 FAM43BQ6ZT52 329 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-202ENST00000359082 KLBQ86Z14 1044 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 HS3ST5Q8IZT8 346 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 IRF7Q92985 503 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 NELL2Q99435 816 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 CCDC106Q9BWC9 280 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 NID2Q14112 1375 aa17.61■□□□□ 0.41
SHANK1-202ENST00000359082 IFT172Q9UG01 1749 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 EMC8O43402 210 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 SOD2P04179 222 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 AKR1C4P17516 323 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 SLC18A1P54219 525 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 OR4D2P58180 307 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 KCTD18Q6PI47 426 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-202ENST00000359082 ARL14Q8N4G2 192 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 KATNBL1Q9H079 304 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 TMEM184CQ9NVA4 438 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 FTSJ1Q9UET6 329 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms