RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 OPTCQ9UBM4 332 aa1.68□□□□□ -2.14
SMARCAD1-202ENST00000359052 LNPEPQ9UIQ6 1025 aa1.68□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZFP69BQ9UJL9 534 aa1.68□□□□□ -2.14
SMARCAD1-202ENST00000359052 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.68□□□□□ -2.141e-6■■■■□ 22
SMARCAD1-202ENST00000359052 PTGDR2Q9Y5Y4 395 aa1.68□□□□□ -2.14
SMARCAD1-202ENST00000359052 WDR87Q6ZQQ6 2873 aa1.68□□□□□ -2.14
SMARCAD1-202ENST00000359052 KCNU1A8MYU2 1149 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 ERVV-1B6SEH8 477 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 H3BNX3 289 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 K7ERI5 159 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PLK4O00444 970 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZFAND5O76080 213 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 AGFG2O95081 481 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 RNASE1P07998 156 aaKnown RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC35E2BP0CK96 405 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC35E2P0CK97 266 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 CYBAP13498 195 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PKMP14618 531 aaKnown RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 MUC1P15941 1255 aaPredicted RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 UQCRC2P22695 453 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 LIG4P49917 911 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 KRTAP10-2P60368 255 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SRP54P61011 504 aaKnown RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 DMP1Q13316 513 aaPredicted RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PPP1R7Q15435 360 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SERTAD4-AS1Q5TG53 156 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PRR5LQ6MZQ0 368 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 METTL7BQ6UX53 244 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 VITQ6UXI7 678 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PQLC2Q6ZP29 291 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 TPRG1Q6ZUI0 275 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 UTS2BQ765I0 119 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PHC2Q8IXK0 858 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC38A6Q8IZM9 456 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 ABI1Q8IZP0 508 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 TEKT4Q8WW24 435 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 FGF11Q92914 225 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 TMEM209Q96SK2 561 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 CITED1Q99966 193 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 OSBPL1AQ9BXW6 950 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PRO3102Q9H379 93 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SEPSECSQ9HD40 501 aaKnown RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 MED9Q9NWA0 146 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 OR6C3Q9NZP0 311 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 VPS18Q9P253 973 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 MAGEL2Q9UJ55 1249 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 A0A1W2PPW3 197 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 C1QTNF3-AMACRE9PGA6 284 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 GPR171O14626 319 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 GSC2O15499 205 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SP1P08047 785 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SERPINA6P08185 405 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 HOXC4P09017 264 aaPredicted RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 ANXA8P13928 327 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 RAB6AP20340 208 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 CALCRP30988 508 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 LMAN1P49257 510 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 GALK1P51570 392 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 BMXP51813 675 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 ATP5J2P56134 94 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 COL28A1Q2UY09 1125 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 ESCO2Q56NI9 601 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 C10orf120Q5SQS8 335 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 ANXA8L1Q5VT79 327 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PRAMEF20Q5VT98 475 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PMF1Q6P1K2 205 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 USP43Q70EL4 1123 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZSWIM9Q86XI8 627 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SPATA4Q8NEY3 305 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 MARCH1Q8TCQ1 289 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC35F5Q8WV83 523 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 FIG4Q92562 907 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PHF21BQ96EK2 531 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PTCD3Q96EY7 689 aaKnown RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 RUNDC3BQ96NL0 473 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SSX3Q99909 188 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 FSD1Q9BTV5 496 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 MCRIP2Q9BUT9 160 aaKnown RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 MAK16Q9BXY0 300 aaKnown RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 MAP6D1Q9H9H5 199 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 DMAP1Q9NPF5 467 aaPredicted RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 ABHD10Q9NUJ1 306 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 COPG2Q9UBF2 871 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 AURKCQ9UQB9 309 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 RHBDD3Q9Y3P4 386 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 LRP12Q9Y561 859 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PMF1-BGLAPU3KQ54 211 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 GSTTP1A0A1W2PQM5 241 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 GLTPD2A6NH11 291 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 NCF1BA6NI72 391 aaPredicted RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 NCF1CA8MVU1 366 aaPredicted RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PATE3B3GLJ2 98 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 GFYI3L273 518 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SGK1O00141 431 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 POLR2DO15514 142 aaKnown RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 TAPBPO15533 448 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 PEX10O60683 326 aa1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 SRPX2O60687 465 aaPredicted RBP1.67□□□□□ -2.14
SMARCAD1-202ENST00000359052 HMOX1P09601 288 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms