RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PRR23D1E9PI22 279 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 SSNA1O43805 119 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 FZD6O60353 706 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 TOXO94900 526 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 PRR23D2P0DMB1 279 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 OSMP13725 252 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 CD9P21926 228 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 PTPN6P29350 595 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 UQCRC1P31930 480 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 RPS25P62851 125 aaKnown RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 CDK10Q15131 360 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 MTFR2Q6P444 385 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 C17orf99Q6UX52 265 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 LINC00299Q6ZSB3 139 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 CCDC149Q6ZUS6 474 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 C6orf120Q7Z4R8 191 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 PDZD3Q86UT5 571 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 TMEM25Q86YD3 366 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 GALNT13Q8IUC8 556 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 VWA5B2Q8N398 1253 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 CHCHD4Q8N4Q1 142 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 OR6C4Q8NGE1 309 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 OR6F1Q8NGZ6 308 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 UBTD2Q8WUN7 234 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 SLC35G5Q96KT7 338 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 SAMD11Q96NU1 681 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 OR51V1Q9H2C8 321 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 MCUBQ9NWR8 336 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 MAT2BQ9NZL9 334 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 CNIH4Q9P003 139 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 BTNL2Q9UIR0 455 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 ADAM30Q9UKF2 790 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 PADI2Q9Y2J8 665 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 GREB1Q4ZG55 1949 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 UNCXA6NJT0 531 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 INMT-MINDY4F8WBC2 141 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 H7BY64 318 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 AKR7A2O43488 359 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ORC5O43913 435 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 MRPS14O60783 128 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 RAB36O95755 333 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CHRNB1P11230 501 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CDH11P55287 796 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SMIM11AP58511 58 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 DBPQ10586 325 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SSX1Q16384 188 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SYPL1Q16563 259 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 GRHL2Q6ISB3 625 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 MZT2AQ6P582 158 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 IL20RBQ6UXL0 311 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PRR23CQ6ZRP0 262 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 NLRP8Q86W28 1048 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SLC30A8Q8IWU4 369 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 HORMAD2Q8N7B1 307 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF557Q8N988 423 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 NLGN4YQ8NFZ3 816 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR4K5Q8NGD3 323 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR52E4Q8NGH9 312 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR8J1Q8NGP2 316 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OR52P1PQ8NH57 321 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 NEIL3Q8TAT5 605 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 C2orf15Q8WU43 125 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PRAP1Q96NZ9 151 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 OPALINQ96PE5 141 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CLSTN3Q9BQT9 956 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 GABARAPL3Q9BY60 117 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CHIAQ9BZP6 476 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 QRSL1Q9H0R6 528 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF334Q9HCZ1 680 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 TXNL4BQ9NX01 149 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ASIC5Q9NY37 505 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZFR2Q9UPR6 939 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SDK1Q7Z5N4 2213 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 SCN4AP35499 1836 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 HMX3A6NHT5 357 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 FAM170BA6NMN3 283 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 I3L521 148 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 CAPN5O15484 640 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 GPR37L1O60883 481 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PCDH8O95206 1070 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 RB1P06400 928 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 EPHX1P07099 455 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 MPC1LP0DKB6 136 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 C1GALT1C1LP0DN25 315 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 HMGA1P17096 107 aaKnown RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF8P17098 575 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 IMPA1P29218 277 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 NOS3P29474 1203 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 DCDC1P59894 354 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 FCHO2Q0JRZ9 810 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 LRRC32Q14392 662 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ZXDCQ2QGD7 858 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PRAMEF14Q5SWL7 426 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PRAMEF13Q5VWM6 474 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 ARL9Q6T311 187 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 HSDL2Q6YN16 418 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 MSANTD1Q6ZTZ1 278 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 C16orf62Q7Z3J2 963 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 FAM20CQ8IXL6 584 aa6.25□□□□□ -1.41
CSDE1-203ENST00000358528 PEX5LQ8IYB4 626 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms