RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GSK3AP49840 483 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 FABP6P51161 128 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 SQSTM1Q13501 440 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PDE7AQ13946 482 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 FAM174BQ3ZCQ3 159 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PPM1JQ5JR12 505 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ZNF765Q7L2R6 523 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 INTS12Q96CB8 462 aaKnown RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 PUS1Q9Y606 427 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHD3-202ENST00000358181 SOX3P41225 446 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 TPRG1LQ5T0D9 272 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 AKR1C8PQ5T2L2 129 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 TSTD2Q5T7W7 516 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 VWA5B1Q5TIE3 1220 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 NLRC3Q7RTR2 1065 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 PRR22Q8IZ63 422 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 SAMD14Q8IZD0 417 aaPredicted RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 SLC37A3Q8NCC5 494 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 DDIT4LQ96D03 193 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 CPXM1Q96SM3 734 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 GMLQ99445 158 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 FADS3Q9Y5Q0 445 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 F5H5K5 113 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 KLRC4O43908 158 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 RAD52P43351 418 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 BMXP51813 675 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 QPCTQ16769 361 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 HSD17B12Q53GQ0 312 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 FBXW12Q6X9E4 464 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 ZNF439Q8NDP4 499 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 ELF4Q99607 663 aaPredicted RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 TWSG1Q9GZX9 223 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 LOC105369274A0A096LPK9 316 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 MATN2O00339 956 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 PET100P0DJ07 73 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 G0S2P27469 103 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 MATKP42679 507 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 OR4N4Q8N0Y3 316 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 CD180Q99467 661 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 TAS2R3Q9NYW6 316 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 RCOR3Q9P2K3 495 aaPredicted RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 C15orf41Q9Y2V0 281 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 TMEM131LA2VDJ0 1609 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 TTLL8A6PVC2 850 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 TUBA4AP68366 448 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 ADAM15Q13444 863 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 TSTQ16762 297 aaKnown RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 NT5DC1Q5TFE4 455 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 CST9LP1Q5W188 147 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 EIF5AL1Q6IS14 154 aaKnown RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 USP43Q70EL4 1123 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 TUSC5Q8IXB3 177 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 C12orf76Q8N812 135 aaPredicted RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 OR4K15Q8NH41 348 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 ANKRA2Q9H9E1 313 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 CHRAC1Q9NRG0 131 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 PTRH2Q9Y3E5 179 aaKnown RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 OR8U9P0C7N5 309 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 POU3F2P20265 443 aaPredicted RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 PMPCAQ10713 525 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 RNF220Q5VTB9 566 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 TMEM234Q8WY98 164 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 FOXRED1Q96CU9 486 aaPredicted RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 P2RY11Q96G91 374 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 PEX11GQ96HA9 241 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 SENP5Q96HI0 755 aaPredicted RBP9.38□□□□□ -0.91
CHD3-202ENST00000358181 NLGN3Q9NZ94 848 aa9.38□□□□□ -0.91
CHD3-202ENST00000358181 KIAA1210Q9ULL0 1709 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 A0A1W2PP55 124 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TGM5O43548 720 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ATG12O94817 140 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 PRKCAP17252 672 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 UBE2G2P60604 165 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ZNF33BQ06732 778 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 NR0B2Q15466 257 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 FIGNQ5HY92 759 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ATG9BQ674R7 924 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 PLPPR4Q7Z2D5 763 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 LRTOMTQ8WZ04 291 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TOMM40LQ969M1 308 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 MUCL1Q96DR8 90 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 KCTD7Q96MP8 289 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ZNF75AQ96N20 296 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 RDH12Q96NR8 316 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 INSL6Q9Y581 213 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 GPR25O00155 361 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TBX18O95935 607 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 SIRPAP78324 504 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 Q1RN00 199 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 P2RY8Q86VZ1 359 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 LRRC18Q8N456 261 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 OR10G2Q8NGC3 310 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 ZNF431Q8TF32 576 aaPredicted RBP9.37□□□□□ -0.91
CHD3-202ENST00000358181 TSPEARQ8WU66 669 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 CHPT1Q8WUD6 406 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 TXNDC15Q96J42 360 aa9.37□□□□□ -0.91
CHD3-202ENST00000358181 EFCAB11Q9BUY7 163 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms