RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 H0YIG0 161 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 CLIC1O00299 241 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 ARPC2O15144 300 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 PPIBP23284 216 aaKnown RBP17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 PTGER1P34995 402 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 AVPR1BP47901 424 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 CDK9P50750 372 aaKnown RBP17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 GZMMP51124 257 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 RHDQ02161 417 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 HSPB3Q12988 150 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 MLC1Q15049 377 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 PROSER1Q86XN7 944 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 OR4N5Q8IXE1 308 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 OR2T12Q8NG77 320 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 RNF31Q96EP0 1072 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 DUS3LQ96G46 650 aaKnown RBP17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 LRGUKQ96M69 825 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 BBS4Q96RK4 519 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 NDC1Q9BTX1 674 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 TPT1P8Q9HAU6 139 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 EGFL7Q9UHF1 273 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 MAU2Q9Y6X3 613 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 SPACA6W5XKT8 324 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 AQP12BA6NM10 295 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 TIAF1O95411 115 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 RNH1P13489 461 aaKnown RBP17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 GPX2P18283 190 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 ALAS2P22557 587 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 NTSP30990 170 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 NCBP2P52298 156 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 OR4D2P58180 307 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 SLC34A1Q06495 639 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 ABHD18Q0P651 414 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 PIP4P1Q86T03 277 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 SERPINA11Q86U17 422 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 SPATA24Q86W54 205 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 AQP12AQ8IXF9 295 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 CCDC116Q8IYX3 515 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 TRIML2Q8N7C3 387 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 PSMA8Q8TAA3 256 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 MVB12AQ96EY5 273 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 PEX11GQ96HA9 241 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 CDC6Q99741 560 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 SLC35A5Q9BS91 424 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 TMEM121BQ9BXQ6 578 aaPredicted RBP17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 RBCK1Q9BYM8 510 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 CLK4Q9HAZ1 481 aaKnown RBP17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 MAGEL2Q9UJ55 1249 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 ACSL6Q9UKU0 697 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 PSME2Q9UL46 239 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 CORO2BQ9UQ03 480 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 CLCA2Q9UQC9 943 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 ENTPD4Q9Y227 616 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 FAM220BPB1ANY3 271 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 H3BNX3 289 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 DSCR3O14972 297 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 FGF17O60258 216 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 LDB3O75112 727 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 ANPEPP15144 967 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 CSNK2A2P19784 350 aaPredicted RBP17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 ATP6V1B2P21281 511 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 OR1D4P47884 311 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 MRPS22P82650 360 aaKnown RBP17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 ID2Q02363 134 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 FOLH1Q04609 750 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 CCDC157Q569K6 752 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 YOD1Q5VVQ6 348 aaPredicted RBP17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 CYP2R1Q6VVX0 501 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 BMPERQ8N8U9 685 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 OR4K14Q8NGD5 310 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 OR5AK3PQ8NH89 298 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 PNPT1Q8TCS8 783 aaKnown RBP17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 ANKRD9Q96BM1 317 aaPredicted RBP17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 EPS8L2Q9H6S3 715 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 APMAPQ9HDC9 416 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 GPATCH2Q9NW75 528 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 TOR4AQ9NXH8 423 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 STOML1Q9UBI4 398 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 NDOR1Q9UHB4 597 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 ANGPTL2Q9UKU9 493 aa17.07■□□□□ 0.32
SMARCD3-202ENST00000356800 NUP210LQ5VU65 1888 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 EFCAB7A8K855 629 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 B4GALT2O60909 372 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 CSTF2P33240 577 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 GCKP35557 465 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 XKP51811 444 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 MVDP53602 400 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 ARSFP54793 590 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 ERV3-1Q14264 604 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 STPG1Q5TH74 334 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 IRAK1BP1Q5VVH5 260 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 PWWP2BQ6NUJ5 590 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 RBM44Q6ZP01 1051 aaKnown RBP17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 OR51Q1Q8NH59 317 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 TANKQ92844 425 aa17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 FAM120BQ96EK7 910 aaKnown RBP17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 REXO5Q96IC2 774 aaKnown RBP17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 RSRC1Q96IZ7 334 aaKnown RBP17.06■□□□□ 0.32
SMARCD3-202ENST00000356800 NEUROD4Q9HD90 331 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms