RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ACTR10Q9NZ32 417 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 COL5A2P05997 1499 aaPredicted RBP12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 SCDO00767 359 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 TSPAN15O95858 294 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 PDYNP01213 254 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 CYP17A1P05093 508 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZNF30P17039 623 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 WNT4P56705 351 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 COMTD1Q86VU5 262 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 PARP16Q8N5Y8 322 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 TRMT10AQ8TBZ6 339 aaKnown RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZDHHC1Q8WTX9 485 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 RAB8BQ92930 207 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ORAI3Q9BRQ5 295 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 TAC3Q9UHF0 121 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 MYO5BQ9ULV0 1848 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 CLDN24A6NM45 220 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 SLC16A5O15375 505 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 NDUFS4O43181 175 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 APODP05090 189 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 NDUFS1P28331 727 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 GCGRP47871 477 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 PXKQ7Z7A4 578 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ADGRG5Q8IZF4 528 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ESX1Q8N693 406 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 CAMKVQ8NCB2 501 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 FBXO15Q8NCQ5 510 aaPredicted RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 FKBP10Q96AY3 582 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 RPL10LQ96L21 214 aaKnown RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 FZD1Q9UP38 647 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 G3V2L1 256 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 UBFD1O14562 309 aaKnown RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 LCMT2O60294 686 aaKnown RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ALDOBP05062 364 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 OSMP13725 252 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 DRD5P21918 477 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 CAP1Q01518 475 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 CYP27C1Q4G0S4 372 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 RNASE10Q5GAN6 216 aaKnown RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 FAM182AQ5T1J6 154 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 FUT10Q6P4F1 479 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 BRAT1Q6PJG6 821 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 GDPD4Q6W3E5 623 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 CPA6Q8N4T0 437 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 TMEM185AQ8NFB2 350 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ELP5Q8TE02 316 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 SLC30A3Q99726 388 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 FN3KQ9H479 309 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 TMEM150CB9EJG8 249 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 KRBOX1C9JBD0 128 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 MMP20O60882 483 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 MAOAP21397 527 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 PTPN6P29350 595 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 TIA1P31483 386 aaKnown RBP eCLIP12.19□□□□□ -0.461e-8■■□□□ 13.7
SYNCRIP-201ENST00000355238 RPS24P62847 133 aaKnown RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 CREB5Q02930 508 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 SELPLGQ14242 412 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ADGRF1Q5T601 910 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 LBX2Q6XYB7 198 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR8K3Q8NH51 312 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 SLC7A13Q8TCU3 470 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ABCG4Q9H172 646 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 SDR39U1Q9NRG7 319 aaPredicted RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 MRPL15Q9P015 296 aaKnown RBP12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 EEF1E1-BLOC1S5C9J1V9 151 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 BLOC1S5-TXNDC5H3BN57 136 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 PRAMEF2O60811 474 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 BPNT1O95861 308 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 EPHX1P07099 455 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZNF35P13682 527 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 GM2AP17900 193 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 NDUFV2P19404 249 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 CNR2P34972 360 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ACVR1BP36896 505 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 ACVRL1P37023 503 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 PCBP2Q15366 365 aaKnown RBP eCLIP12.19□□□□□ -0.463e-10■■■■■ 64.3
SYNCRIP-201ENST00000355238 KDM1BQ8NB78 822 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR6N2Q8NGY6 317 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 SNX18Q96RF0 628 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 SULT4A1Q9BR01 284 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 MRI1Q9BV20 369 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 HEBP1Q9NRV9 189 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 VNN3Q9NY84 501 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 IL37Q9NZH6 218 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 DHDHQ9UQ10 334 aa12.19□□□□□ -0.46
SYNCRIP-201ENST00000355238 CRHBPP24387 322 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 DPP6P42658 865 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 MECP2P51608 486 aaKnown RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 PLAG1Q6DJT9 500 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 PSRC1Q6PGN9 363 aaPredicted RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 TPRG1Q6ZUI0 275 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR5T2Q8NGG2 359 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 TMEM125Q96AQ2 219 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 MFFQ9GZY8 342 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 MEPEQ9NQ76 525 aaPredicted RBP12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 POT1Q9NUX5 634 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 LIPT1Q9Y234 373 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 PTGDR2Q9Y5Y4 395 aa12.18□□□□□ -0.46
SYNCRIP-201ENST00000355238 TRBV23OR9-2A0A075B6M9 112 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms