RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 EVPLLA8MZ36 301 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 CXCR6O00574 342 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 RNASET2O00584 256 aaKnown RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 GSTA4O15217 222 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 WIPF1O43516 503 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 PCDH7O60245 1069 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 TBX19O60806 448 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 RASAL1O95294 804 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 ETHE1O95571 254 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 CEACAM5P06731 702 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 ANXA4P09525 319 aaPredicted RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 COX7A2P14406 83 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 NCK1P16333 377 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 IDSP22304 550 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 CXCR2P25025 360 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 GSTM2P28161 218 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 CLCNKAP51800 687 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 RPS13P62277 151 aaKnown RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 DDX39BQ13838 428 aaKnown RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 PDE7AQ13946 482 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 GTDC1Q4AE62 458 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 CATSPEREQ5SY80 951 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 PHF19Q5T6S3 580 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 CPZQ66K79 652 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 OR4F3Q6IEY1 312 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 OR52E8Q6IFG1 317 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 JMJD6Q6NYC1 403 aaPredicted RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 DOK6Q6PKX4 331 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 TMIGD1Q6UXZ0 262 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 ZNF517Q6ZMY9 492 aaPredicted RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 ZBTB49Q6ZSB9 765 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 R3HCC1LQ7Z5L2 792 aaKnown RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 AMIGO2Q86SJ2 522 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 C17orf64Q86WR6 236 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 CARM1Q86X55 608 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 ST13P4Q8IZP2 240 aaPredicted RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 EID3Q8N140 333 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 RNF175Q8N4F7 328 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 SPDYE1Q8NFV5 336 aaPredicted RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 OR7A2PQ8NGA2 310 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 OR4K1Q8NGD4 311 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 OR10A6Q8NH74 314 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 NUDT8Q8WV74 236 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 PPWD1Q96BP3 646 aaKnown RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 FAM120BQ96EK7 910 aaKnown RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 EGLN2Q96KS0 407 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 PRPF18Q99633 342 aaKnown RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 CIB1Q99828 191 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 THUMPD3Q9BV44 507 aaKnown RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 DUSP26Q9BV47 211 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 EBPLQ9BY08 206 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 ANKRD60Q9BZ19 345 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 IKZF5Q9H5V7 419 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 ZNF696Q9H7X3 374 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 COQ10BQ9H8M1 238 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 USP22Q9UPT9 525 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 HS3ST3A1Q9Y663 406 aa7.78□□□□□ -1.16
CD44-205ENST00000352818 ARHGEF17Q96PE2 2063 aaPredicted RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 ANK2Q01484 3957 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 FLNAP21333 2647 aaKnown RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 A0A1W2PPV9 198 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 C1orf226A1L170 272 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 C7orf72A4D263 438 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 ANKUB1A6NFN9 424 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 CACNB4O00305 520 aaPredicted RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 SOCS2O14508 198 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 TXNDC9O14530 226 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 TOR1BO14657 336 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 FPGTO14772 594 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 ACOX3O15254 700 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 CLOCKO15516 846 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 LRRTM2O43300 516 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 KDM1AO60341 852 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 DEAF1O75398 565 aaPredicted RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 CREG1O75629 220 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 CCNDBP1O95273 360 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 TNFAIP8O95379 198 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 HPRP00739 348 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 ABCB1P08183 1280 aaPredicted RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 UBTFL6P0CB48 400 aaPredicted RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 DDX5P17844 614 aaKnown RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 GPX2P18283 190 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 TCN2P20062 427 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 PTX3P26022 381 aaPredicted RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 PKLRP30613 574 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 CDKN2CP42773 168 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 ARFIP1P53367 373 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 CHRNB3Q05901 458 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 PGS1Q32NB8 556 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 PYCR3Q53H96 274 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 NHSL2Q5HYW2 709 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 CPTPQ5TA50 214 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 THEMIS2Q5TEJ8 643 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 FAM71E1Q6IPT2 247 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 WASH2PQ6VEQ5 465 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 DNAJC14Q6Y2X3 702 aaPredicted RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 COMMD6Q7Z4G1 85 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 ZNF438Q7Z4V0 828 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 DCP2Q8IU60 420 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms