RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 TRNT1Q96Q11 434 aaKnown RBP20.88■□□□□ 0.93
NKX2-4-201ENST00000351817 TEFMQ96QE5 360 aaKnown RBP20.88■□□□□ 0.93
NKX2-4-201ENST00000351817 ZNF607Q96SK3 696 aa20.88■□□□□ 0.93
NKX2-4-201ENST00000351817 SIRT3Q9NTG7 399 aaPredicted RBP20.88■□□□□ 0.93
NKX2-4-201ENST00000351817 PCYT1BQ9Y5K3 369 aaPredicted RBP20.88■□□□□ 0.93
NKX2-4-201ENST00000351817 HMGN4O00479 90 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 OR10H3O60404 316 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 SNX4O95219 450 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 HNRNPA1P09651 372 aaKnown RBP eCLIP20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 ALOX12P18054 663 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 CSTF2P33240 577 aaKnown RBP eCLIP20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 HSD17B2P37059 387 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 KCNJ5P48544 419 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 DGKEP52429 567 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 ELAVL3Q14576 367 aaKnown RBP20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 SSX1Q16384 188 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 SPANXN2Q5MJ10 180 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 ERN2Q76MJ5 926 aaKnown RBP20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 KLHL6Q8WZ60 621 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 ERLEC1Q96DZ1 483 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 NUAK2Q9H093 628 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 DYRK4Q9NR20 520 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 CUEDC1Q9NWM3 386 aaPredicted RBP20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 PCDHGB6Q9Y5F9 930 aa20.87■□□□□ 0.93
NKX2-4-201ENST00000351817 RPN2P04844 631 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 CCR8P51685 355 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 SMIM11AP58511 58 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 MESP2Q0VG99 397 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 C12orf73Q69YU5 71 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 ZBED6CLQ96FA7 236 aaPredicted RBP20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 ZNF764Q96H86 408 aaPredicted RBP20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 TXNDC15Q96J42 360 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 OPALINQ96PE5 141 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 RSPO3Q9BXY4 272 aaPredicted RBP20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 RACGAP1Q9H0H5 632 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 LINC01553A4QN01 128 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 LOC110117498-PIK3R3F6TDL0 507 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 B4GALT2O60909 372 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 SEMA7AO75326 666 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 SCG5P05408 212 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 GSTM5P46439 218 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 XKP51811 444 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 REEP5Q00765 189 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 ZNF697Q5TEC3 545 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 CASP12Q6UXS9 341 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 DEF8Q6ZN54 512 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 CCDC190Q86UF4 302 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 NUDT13Q86X67 352 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 OR5K2Q8NHB8 316 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 PIK3R3Q92569 461 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 EXOSC8Q96B26 276 aaKnown RBP20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 COX14Q96I36 57 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 PCBD2Q9H0N5 130 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 NT5DC2Q9H857 520 aa20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 GPC6Q9Y625 555 aaPredicted RBP20.86■□□□□ 0.93
NKX2-4-201ENST00000351817 A0A075B6Q4 140 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 ANHXE9PGG2 379 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 GPX5O75715 221 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 SOX14O95416 240 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 DNTTP04053 509 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 NCF4Q15080 339 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 ETFBKMTQ8IXQ9 262 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 VANGL1Q8TAA9 524 aaPredicted RBP20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 CXorf40AQ8TE69 158 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 TMEM80Q96HE8 168 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 SEMA3GQ9NS98 782 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 C5AR2Q9P296 337 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 CRNNQ9UBG3 495 aaPredicted RBP20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 SEC14L3Q9UDX4 400 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 ITGB1BP2Q9UKP3 347 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 ACAD8Q9UKU7 415 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 LSM2Q9Y333 95 aaKnown RBP20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 H3BN98 237 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 KCNK2O95069 426 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 CCT3P49368 545 aaKnown RBP20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 TPTEP56180 551 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 SELENBP1Q13228 472 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 PGBD2Q6P3X8 592 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 CLIP4Q8N3C7 705 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 PLA2G15Q8NCC3 412 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 RGMAQ96B86 450 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 PITHD1Q9GZP4 211 aaPredicted RBP20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 POLR2J3Q9H1A7 115 aaKnown RBP20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 HHATLQ9HCP6 504 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 ACSS1Q9NUB1 689 aaPredicted RBP20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 DNAJC27Q9NZQ0 273 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 SLC23A2Q9UGH3 650 aa20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 RPL36Q9Y3U8 105 aaKnown RBP20.85■□□□□ 0.93
NKX2-4-201ENST00000351817 SNPHO15079 494 aa20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 SLC28A2O43868 658 aa20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 FEN1P39748 380 aaKnown RBP20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 DEFA1P59665 94 aa20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 DEFA3P59666 94 aa20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 DOC2BQ14184 412 aa20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 ADAMTSL4Q6UY14 1074 aa20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 GDPGP1Q6ZNW5 385 aa20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 TRIM69Q86WT6 500 aa20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 KRT73Q86Y46 540 aa20.84■□□□□ 0.93
NKX2-4-201ENST00000351817 OR8J1Q8NGP2 316 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms