RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TLX2O43763 284 aaPredicted RBP17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 CCNKO75909 580 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 CLEC2LP0C7M8 214 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 COPZ1P61923 177 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 TEKQ02763 1124 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 DCST1Q5T197 706 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 CCDC149Q6ZUS6 474 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 FAM129CQ86XR2 697 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 ASB15Q8WXK1 588 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 OR2A14Q96R47 310 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 GPA33Q99795 319 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 POLR2J3Q9H1A7 115 aaKnown RBP17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 CARD8Q9Y2G2 431 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 H7BY64 318 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 HMGN4O00479 90 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 PRKRAO75569 313 aaKnown RBP17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 NTN1O95631 604 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 SCG5P05408 212 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 RHOP08100 348 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 XKP51811 444 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 TAB1Q15750 504 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 SPDYE7PQ495Y7 208 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 ANKRD33Q7Z3H0 272 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 PLA2G15Q8NCC3 412 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 XAGE5Q8WWM1 108 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 NXPE3Q969Y0 559 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 PRAP1Q96NZ9 151 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 TSSK6Q9BXA6 273 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 POLR2J2Q9GZM3 115 aaKnown RBP17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 SMURF1Q9HCE7 757 aa17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 TEX10Q9NXF1 929 aaPredicted RBP17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 NFKBIL1Q9UBC1 381 aaPredicted RBP17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 YARS2Q9Y2Z4 477 aaKnown RBP17.17■□□□□ 0.34
PTP4A3-202ENST00000349124 PRKYO43930 277 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 TMPRSS11DO60235 418 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 OR12D1P0DN82 309 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 DDCP20711 480 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 CD72P21854 359 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 ZNF91Q05481 1191 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 ILKQ13418 452 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 FLYWCH1Q4VC44 716 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 RSBN1Q5VWQ0 802 aaPredicted RBP17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 SAXO2Q658L1 398 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 PGBD2Q6P3X8 592 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 GATAD2AQ86YP4 633 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 ARRDC3Q96B67 414 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 NEURL3Q96EH8 262 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 MACROD1Q9BQ69 325 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 YIPF4Q9BSR8 244 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 FZD3Q9NPG1 666 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 SIRT3Q9NTG7 399 aaPredicted RBP17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 TMEM39AQ9NV64 488 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 SPATA7Q9P0W8 599 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 PDZK1P1A8MUH7 402 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 NME6O75414 186 aaPredicted RBP17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 PAPLNO95428 1278 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 CYP17A1P05093 508 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 ALPPL2P10696 532 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 CSTF2P33240 577 aaKnown RBP eCLIP17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 WDR5P61964 334 aaKnown RBP17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 UNC5DQ6UXZ4 953 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 KIAA0907Q7Z7F0 614 aaPredicted RBP17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 C11orf96Q7Z7L8 435 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 FAM20CQ8IXL6 584 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 FBXO15Q8NCQ5 510 aaPredicted RBP17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 ZNF296Q8WUU4 475 aaPredicted RBP17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 KLHL6Q8WZ60 621 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 NEK6Q9HC98 313 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 LHX9Q9NQ69 397 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 SEMA3GQ9NS98 782 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 SAGE1Q9NXZ1 904 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 ZNF232Q9UNY5 417 aa17.16■□□□□ 0.34
PTP4A3-202ENST00000349124 DENND4CQ5VZ89 1909 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 GLOD5A6NK44 160 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 TP53P04637 393 aaPredicted RBP17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 H1F0P07305 194 aaKnown RBP17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 FHP07954 510 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 SRPRAP08240 638 aaKnown RBP17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 C6P13671 934 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 BSGP35613 385 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 RPL3P39023 403 aaKnown RBP17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 OR2B6P58173 313 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 ZNF486Q96H40 463 aaPredicted RBP17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 TMEM80Q96HE8 168 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 RNF208Q9H0X6 261 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 DKK3Q9UBP4 350 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 ICKQ9UPZ9 632 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 PLXNA2O75051 1894 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 PRRT4C9JH25 899 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 SLC28A2O43868 658 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 LZTS3O60299 673 aaPredicted RBP17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 ADAP00813 363 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 ETV6P41212 452 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 RFX2P48378 723 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 ZNF77Q15935 545 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 ZNF79Q15937 498 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 C6orf183Q5T699 404 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 SLX4IPQ5VYV7 408 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 PLPP4Q5VZY2 271 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 ACSM5Q6NUN0 579 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms