RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 FZD2Q14332 565 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 SUZ12Q15022 739 aaKnown RBP8.75□□□□□ -1.01
ATG4A-202ENST00000345734 PLCL1Q15111 1095 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 RGNQ15493 299 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 NHSL2Q5HYW2 709 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 TMTC4Q5T4D3 741 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF425Q6IV72 752 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.75□□□□□ -1.01
ATG4A-202ENST00000345734 ZSCAN1Q8NBB4 408 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 FLVCR1-AS1Q8TAF5 88 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 MTERF3Q96E29 417 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 SLC6A18Q96N87 628 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 FCRL4Q96PJ5 515 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 RAPGEFL1Q9UHV5 662 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 CEP192Q8TEP8 1941 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 A0A0A6YYD5 115 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 SPTY2D1-AS1A0A0U1RR47 76 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 SLC22A31A6NKX4 558 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 FAM170BA6NMN3 283 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 WASHC1A8K0Z3 465 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 ERI3O43414 337 aaKnown RBP8.75□□□□□ -1.01
ATG4A-202ENST00000345734 OIP5O43482 229 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 PRKRAO75569 313 aaKnown RBP8.75□□□□□ -1.01
ATG4A-202ENST00000345734 CCNDBP1O95273 360 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 CCDC159P0C7I6 412 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 ETFAP13804 333 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 CRATP43155 626 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 SSR2P43308 183 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 CHN2P52757 468 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 IST1P53990 364 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 TUBA4AP68366 448 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 LRRC74AQ0VAA2 488 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 C1orf61Q13536 156 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 LEXMQ3ZCV2 418 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 SMUG1Q53HV7 270 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 IYDQ6PHW0 289 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 DGLUCYQ7Z3D6 616 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 CHERPQ8IWX8 916 aaKnown RBP8.75□□□□□ -1.01
ATG4A-202ENST00000345734 TRIM48Q8IWZ4 208 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 PACRGLQ8N7B6 248 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 MFSD9Q8NBP5 474 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 TTLQ8NG68 377 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 OR10G6Q8NH81 332 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 TMBIM1Q969X1 311 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 MS4A6EQ96DS6 147 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 PYURFQ96I23 114 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 QRFPRQ96P65 431 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 BDH2Q9BUT1 245 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 OSBPL11Q9BXB4 747 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 CXorf36Q9H7Y0 433 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 DDX31Q9H8H2 851 aaKnown RBP8.75□□□□□ -1.01
ATG4A-202ENST00000345734 LTB4R2Q9NPC1 389 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 OLAHQ9NV23 265 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 TAS2R9Q9NYW1 312 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF639Q9UID6 485 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 DMTF1Q9Y222 760 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 AP1M2Q9Y6Q5 423 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 MYOCOSA0A1B0GUC4 107 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 A0A1W2PPC1 479 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 A0A1W2PPC4 97 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 PRSS23O95084 383 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 NAT2P11245 290 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 NELFEP18615 380 aaKnown RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 POLR2CP19387 275 aaPredicted RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 PPIBP23284 216 aaKnown RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 AQP1P29972 269 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 KDELR2P33947 212 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 SOAT1P35610 550 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 AHRP35869 848 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 CRYBA2P53672 197 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 MYBPC1Q00872 1141 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 PPP1R8Q12972 351 aaKnown RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 SLC5A12Q1EHB4 618 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 TOR1AIP1Q5JTV8 583 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 OTUD3Q5T2D3 398 aaPredicted RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 ERICH5Q6P6B1 374 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 NLRC3Q7RTR2 1065 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 VTCN1Q7Z7D3 282 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 PAQR7Q86WK9 346 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 RNF130Q86XS8 419 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 MFSD2AQ8NA29 543 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 OR8K5Q8NH50 307 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 MAGEE2Q8TD90 523 aaPredicted RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 EXOSC8Q96B26 276 aaKnown RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 OR2A14Q96R47 310 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 SARGQ9BW04 601 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 KLHL25Q9H0H3 589 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 PRDM7Q9NQW5 492 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 GPR27Q9NS67 375 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 CPNE7Q9UBL6 633 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 APOBEC3BQ9UH17 382 aaKnown RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 FBXO9Q9UK97 447 aaPredicted RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 ADAM29Q9UKF5 820 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 SNX7Q9UNH6 387 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 SNX8Q9Y5X2 465 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 SPAG17Q6Q759 2223 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 GSAPA4D1B5 854 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 OR6C74A6NCV1 312 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 TOR1BO14657 336 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 PRAMEF10O60809 474 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms