RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 C6orf136Q5SQH8 315 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 JMJD6Q6NYC1 403 aaPredicted RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 SLC48A1Q6P1K1 146 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 PAPD4Q6PIY7 484 aaKnown RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 RGS9BPQ6ZS82 235 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 LANCL3Q6ZV70 420 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 R3HCC1LQ7Z5L2 792 aaKnown RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 TMEM151BQ8IW70 566 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 ST13P4Q8IZP2 240 aaPredicted RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 GALNT16Q8N428 558 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 OR2T11Q8NH01 316 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 OR14A16Q8NHC5 309 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 CDC26Q8NHZ8 85 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 DNAJB14Q8TBM8 379 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 EXTL1Q92935 676 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 PRPF18Q99633 342 aaKnown RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 EBPLQ9BY08 206 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 NUF2Q9BZD4 464 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 ADNPQ9H2P0 1102 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 MEAF6Q9HAF1 191 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 ZNF160Q9HCG1 818 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 MYNNQ9NPC7 610 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 NECTIN3Q9NQS3 549 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 NOP53Q9NZM5 478 aaKnown RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 MARCOQ9UEW3 520 aaPredicted RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 TEKT2Q9UIF3 430 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 POLR3HQ9Y535 204 aaPredicted RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 PTGDR2Q9Y5Y4 395 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 NBEAQ8NFP9 2946 aa11.08□□□□□ -0.63
SNCA-202ENST00000345009 PGRMC2O15173 223 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 SIAH2O43255 324 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 ERAL1O75616 437 aaKnown RBP11.08□□□□□ -0.64
SNCA-202ENST00000345009 SEC24DO94855 1032 aaPredicted RBP11.08□□□□□ -0.64
SNCA-202ENST00000345009 SERPINA7P05543 415 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 IL3P08700 152 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 SLC35E2P0CK97 266 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 ALOX15P16050 662 aaPredicted RBP11.08□□□□□ -0.64
SNCA-202ENST00000345009 PORP16435 677 aaPredicted RBP11.08□□□□□ -0.64
SNCA-202ENST00000345009 LBPP18428 481 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 DDCP20711 480 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 ITGA3P26006 1051 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 GALNSP34059 522 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 STT3AP46977 705 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 HNRNPFP52597 415 aaKnown RBP11.08□□□□□ -0.64
SNCA-202ENST00000345009 POLE2P56282 527 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 SOX8P57073 446 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 ERVK-8P63133 956 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 PCOLCEQ15113 449 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 BTBD16Q32M84 506 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 PLAG1Q6DJT9 500 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 ATG14Q6ZNE5 492 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 TMEM52Q8NDY8 209 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 M1APQ8TC57 530 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 HPS1Q92902 700 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 ANKRD9Q96BM1 317 aaPredicted RBP11.08□□□□□ -0.64
SNCA-202ENST00000345009 KLHL29Q96CT2 875 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 WBP1Q96G27 269 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 ART5Q96L15 291 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 PPP1R36Q96LQ0 422 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 C3orf30Q96M34 536 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 LHPPQ9H008 270 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 AKTIPQ9H8T0 292 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNCA-202ENST00000345009 TEX10Q9NXF1 929 aaPredicted RBP11.08□□□□□ -0.64
SNCA-202ENST00000345009 GPR83Q9NYM4 423 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 COPS7AQ9UBW8 275 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 TUBD1Q9UJT1 453 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 UTS2RQ9UKP6 389 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 ENTPD4Q9Y227 616 aa11.08□□□□□ -0.64
SNCA-202ENST00000345009 IGHV3-20A0A0C4DH32 117 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 SAGE2PA6NJ88 616 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 A6NL46 340 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 A8MUA0 341 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 TCP11X1B4DZS4 312 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 FGF17O60258 216 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 BCKDHAP12694 445 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 PRPS1L1P21108 318 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 MPIP34949 423 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 HPCAL1P37235 193 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 IGLV3-21P80748 117 aaPredicted RBP11.07□□□□□ -0.64
SNCA-202ENST00000345009 MYBPC3Q14896 1274 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 RPS6KA2Q15349 733 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 AGAP7PQ5VUJ5 663 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 IL23RQ5VWK5 629 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 FAM219BQ5XKK7 198 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 ZNF787Q6DD87 383 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 NXNQ6DKJ4 435 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 ACAD11Q709F0 780 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 SPATA19Q7Z5L4 167 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 OR4N5Q8IXE1 308 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 NATD1Q8N6N6 113 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 MORN4Q8NDC4 146 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 B3GNT7Q8NFL0 401 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 TM9SF4Q92544 642 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 RIT1Q92963 219 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 MTERF3Q96E29 417 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 CRELD1Q96HD1 420 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 THOC3Q96J01 351 aaKnown RBP11.07□□□□□ -0.64
SNCA-202ENST00000345009 FCRL1Q96LA6 429 aa11.07□□□□□ -0.64
SNCA-202ENST00000345009 IMMP1LQ96LU5 166 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms