RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 KLHL31Q9H511 634 aa20.3■□□□□ 0.84
CCDC38-201ENST00000344280 TRNAU1APQ9NX07 287 aaKnown RBP20.3■□□□□ 0.84
CCDC38-201ENST00000344280 PRKAG2Q9UGJ0 569 aa20.3■□□□□ 0.84
CCDC38-201ENST00000344280 KCNK6Q9Y257 313 aa20.3■□□□□ 0.84
CCDC38-201ENST00000344280 RWDD3Q9Y3V2 267 aa20.3■□□□□ 0.84
CCDC38-201ENST00000344280 C4orf51C9J302 202 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 SCAMP1O15126 338 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 TBX19O60806 448 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 KAT7O95251 611 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 OR12D1P0DN82 309 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 CCT3P49368 545 aaKnown RBP20.29■□□□□ 0.84
CCDC38-201ENST00000344280 CDC42P60953 191 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 IRF3Q14653 427 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 IRF4Q15306 451 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 C2orf27AQ580R0 203 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 ARMCX4Q5H9R4 360 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 PSRC1Q6PGN9 363 aaPredicted RBP20.29■□□□□ 0.84
CCDC38-201ENST00000344280 KIAA1958Q8N8K9 716 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 MCFD2Q8NI22 146 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 RGMAQ96B86 450 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 IL4I1Q96RQ9 567 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 NEURL2Q9BR09 285 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 TEX101Q9BY14 249 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 IMP3Q9NV31 184 aaKnown RBP20.29■□□□□ 0.84
CCDC38-201ENST00000344280 REV1Q9UBZ9 1251 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 SNRNP200O75643 2136 aaKnown RBP20.29■□□□□ 0.84
CCDC38-201ENST00000344280 DSPPQ9NZW4 1301 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 PRR23AA6NEV1 266 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 KMOO15229 486 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 ELAVL4P26378 380 aaKnown RBP20.29■□□□□ 0.84
CCDC38-201ENST00000344280 DNASE1L3Q13609 305 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 PTCHD4Q6ZW05 846 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 CACTIN-AS1Q8N1I8 211 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 CREB3L4Q8TEY5 395 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 MAPKAP1Q9BPZ7 522 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 DPH7Q9BTV6 452 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 CENPOQ9BU64 300 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 WDR26Q9H7D7 661 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 DPP7Q9UHL4 492 aa20.29■□□□□ 0.84
CCDC38-201ENST00000344280 A0A1W2PP55 124 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 KPNA4O00629 521 aaPredicted RBP20.28■□□□□ 0.84
CCDC38-201ENST00000344280 DSCR3O14972 297 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 CA3P07451 260 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 DBTP11182 482 aaKnown RBP20.28■□□□□ 0.84
CCDC38-201ENST00000344280 HSD17B2P37059 387 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 OR2A1Q8NGT9 310 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 PHOSPHO2Q8TCD6 241 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 ZBED6CLQ96FA7 236 aaPredicted RBP20.28■□□□□ 0.84
CCDC38-201ENST00000344280 TREX2Q9BQ50 279 aaPredicted RBP20.28■□□□□ 0.84
CCDC38-201ENST00000344280 GLIPR2Q9H4G4 154 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 POLE4Q9NR33 117 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 ZFR2Q9UPR6 939 aaKnown RBP20.28■□□□□ 0.84
CCDC38-201ENST00000344280 A0A0A6YYD5 115 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 KRBA1A5PL33 1030 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 ARRDC5A6NEK1 342 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 OR52A4PA6NMU1 304 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 CDH3P22223 829 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 RGS6P49758 472 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 TEKQ02763 1124 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 CD300CQ08708 224 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 CST6Q15828 149 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 NDUFAF5Q5TEU4 345 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 OR4C11Q6IEV9 310 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 PSMA8Q8TAA3 256 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 PLA2G2FQ9BZM2 168 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 PCBD2Q9H0N5 130 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 DDX31Q9H8H2 851 aaKnown RBP20.28■□□□□ 0.84
CCDC38-201ENST00000344280 KCNK12Q9HB15 430 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 STON1Q9Y6Q2 735 aa20.28■□□□□ 0.84
CCDC38-201ENST00000344280 SLC28A2O43868 658 aa20.27■□□□□ 0.84
CCDC38-201ENST00000344280 ALPPL2P10696 532 aa20.27■□□□□ 0.84
CCDC38-201ENST00000344280 KCNJ5P48544 419 aa20.27■□□□□ 0.84
CCDC38-201ENST00000344280 ZNF750Q32MQ0 723 aa20.27■□□□□ 0.84
CCDC38-201ENST00000344280 FAM46CQ5VWP2 391 aa20.27■□□□□ 0.84
CCDC38-201ENST00000344280 XAGE5Q8WWM1 108 aa20.27■□□□□ 0.84
CCDC38-201ENST00000344280 OR51I1Q9H343 314 aa20.27■□□□□ 0.84
CCDC38-201ENST00000344280 IFT52Q9Y366 437 aa20.27■□□□□ 0.84
CCDC38-201ENST00000344280 LRIT2A6NDA9 550 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 METTL15A6NJ78 407 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 ZW10O43264 779 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 OR10H3O60404 316 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 RPLP0P05388 317 aaKnown RBP20.27■□□□□ 0.83
CCDC38-201ENST00000344280 UGT2B10P36537 528 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 SSR2P43308 183 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 LSM11P83369 360 aaKnown RBP eCLIP20.27■□□□□ 0.83
CCDC38-201ENST00000344280 PRDX1Q06830 199 aaKnown RBP20.27■□□□□ 0.83
CCDC38-201ENST00000344280 GPM6BQ13491 265 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 PIN1Q13526 163 aaPredicted RBP20.27■□□□□ 0.83
CCDC38-201ENST00000344280 RUNX3Q13761 415 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 ZNF404Q494X3 552 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 KIAA1161Q6NSJ0 714 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 FBXO46Q6PJ61 603 aaPredicted RBP20.27■□□□□ 0.83
CCDC38-201ENST00000344280 HDDC3Q8N4P3 179 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 QRFPRQ96P65 431 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 CHCHD6Q9BRQ6 235 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 MVB12BQ9H7P6 319 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 SYNPO2LQ9H987 977 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 SEC14L3Q9UDX4 400 aa20.27■□□□□ 0.83
CCDC38-201ENST00000344280 WBP11Q9Y2W2 641 aaKnown RBP20.27■□□□□ 0.83
CCDC38-201ENST00000344280 M0R3H8 397 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms