RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 MLLT1Q03111 559 aaPredicted RBP9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 DUSP2Q05923 314 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 ERV3-1Q14264 604 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 TEAD4Q15561 434 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 SPATS1Q496A3 300 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 BROXQ5VW32 411 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 FBXO15Q8NCQ5 510 aaPredicted RBP9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 PAPD5Q8NDF8 572 aaKnown RBP9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 OR2L8Q8NGY9 312 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 IL20RAQ9UHF4 553 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 ATP6V1HQ9UI12 483 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 A8MU76 341 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 POU2F2P09086 479 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 UQCRC2P22695 453 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 SEPHS1P49903 392 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 MLLT10P55197 1068 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 REEP3Q6NUK4 255 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 SLC37A2Q8TED4 501 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 NIPSNAP1Q9BPW8 284 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 MVB12BQ9H7P6 319 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 LHX9Q9NQ69 397 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 ANKMY1Q9P2S6 941 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 KLF15Q9UIH9 416 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 TMCC3Q9ULS5 477 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 MRPS2Q9Y399 296 aaKnown RBP9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 MUC3AQ02505 3323 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 F3P13726 295 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 UGT2B7P16662 529 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 SLC5A2P31639 672 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 HSD17B2P37059 387 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 RPP38P78345 283 aaKnown RBP9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 SHC2P98077 582 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 PPP2R2BQ00005 443 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 ARHGAP19Q14CB8 494 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 SYT16Q17RD7 645 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 DEFB133Q30KQ1 61 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 C6orf141Q5SZD1 244 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 GALNT18Q6P9A2 607 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 GOLM1Q8NBJ4 401 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 C12orf43Q96C57 262 aaKnown RBP9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 MS4A6EQ96DS6 147 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 CSF3RQ99062 836 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 GABRG3Q99928 467 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 TTYH1Q9H313 450 aaPredicted RBP9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 PREBQ9HCU5 417 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 KCNE3Q9Y6H6 103 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 P2RX6O15547 441 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 KDM1AO60341 852 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CTSVO60911 334 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 KLHL18O94889 574 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 INMTO95050 263 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 TNFP01375 233 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CTSBP07858 339 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 PCGF2P35227 344 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CTSKP43235 329 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CRYBA2P53672 197 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 SELENOWP63302 87 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 KCNJ10P78508 379 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 ADARB1P78563 741 aaKnown RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 GPR68Q15743 365 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 FIGLAQ6QHK4 219 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 ASPGQ86U10 573 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CHDHQ8NE62 594 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 AICDAQ9GZX7 198 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CD320Q9NPF0 282 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 TMEM45AQ9NWC5 275 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 ACTR10Q9NZ32 417 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 NDUFAF4Q9P032 175 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 HCN3Q9P1Z3 774 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CPNE7Q9UBL6 633 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 BLOC1S6Q9UL45 172 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 SGK494L7N484 410 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 GNB5O14775 395 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 ATP5A1P25705 553 aaKnown RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 VASPP50552 380 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 HHEXQ03014 270 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 APOFQ13790 326 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 IQCF1Q8N6M8 205 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 DNAJA3Q96EY1 480 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 NRBF2Q96F24 287 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 NECTIN4Q96NY8 510 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 WFDC6Q9BQY6 131 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 TMEM74BQ9NUR3 256 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 SCN3BQ9NY72 215 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 TMEFF2Q9UIK5 374 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 MAP1BP46821 2468 aaKnown RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CLDN24A6NM45 220 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CPSF4LA6NMK7 179 aaKnown RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 KPNA4O00629 521 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 B4GALT2O60909 372 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 TRMUO75648 421 aaKnown RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 IFNA14P01570 189 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 NR2F6P10588 404 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 MASP1P48740 699 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 XKP51811 444 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 STXBP1P61764 594 aaKnown RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 LSM11P83369 360 aaKnown RBP eCLIP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CLEC12AQ5QGZ9 265 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 SHQ1Q6PI26 577 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms