RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TRBV11-1A0A0K0K1C0 115 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 A0A1W2PS29 197 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 TMEM114B3SHH9 223 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 PIP5K1BO14986 540 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 RGS14O43566 566 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 MAN1A2O60476 641 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 SEC22BO75396 215 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 F10P00742 488 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 PRPH2P23942 346 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 PIK3R1P27986 724 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 ALDH9A1P49189 494 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 CLCN2P51788 898 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 ABCE1P61221 599 aaKnown RBP14.22□□□□□ -0.13
UBE3B-201ENST00000340074 PLIN5Q00G26 463 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 ACER2Q5QJU3 275 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 SLC48A1Q6P1K1 146 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 DDIASQ8IXT1 998 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 ST13P4Q8IZP2 240 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-201ENST00000340074 SLC5A8Q8N695 610 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 ZNF321PQ8N8H1 164 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 MORN4Q8NDC4 146 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 OR4K14Q8NGD5 310 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 C16orf78Q8WTQ4 265 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 FAIM2Q9BWQ8 316 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 OR8D2Q9GZM6 311 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 LUZP4Q9P127 313 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 HEY2Q9UBP5 337 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 CES1P1Q9UKY3 287 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 B3GNT3Q9Y2A9 372 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 DLGAP4Q9Y2H0 992 aa14.22□□□□□ -0.13
UBE3B-201ENST00000340074 POLR3HQ9Y535 204 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-201ENST00000340074 ZNF462Q96JM2 2506 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 NPIPB8E9PQR5 432 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 OR10H2O60403 315 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 DDAH2O95865 285 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 WDPCPO95876 746 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 IL3P08700 152 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 ANXA4P09525 319 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-201ENST00000340074 COX7A2P14406 83 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 GRK2P25098 689 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 CASRP41180 1078 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 SLC1A6P48664 564 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 XKP51811 444 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 ARG2P78540 354 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 STX3Q13277 289 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 KIAA0040Q15053 153 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 NR6A1Q15406 480 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 MEP1AQ16819 746 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 PLEKHN1Q494U1 663 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-201ENST00000340074 TTMPQ5BVD1 217 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 HOMEZQ8IX15 550 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 BEST3Q8N1M1 668 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 ZNF781Q8N8C0 355 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 Q8NA96 180 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 CATSPER1Q8NEC5 780 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 OR1N1Q8NGS0 311 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 SLC2A12Q8TD20 617 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 DOK4Q8TEW6 326 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 THAP3Q8WTV1 239 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-201ENST00000340074 PNPLA2Q96AD5 504 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 ATP6V1G3Q96LB4 118 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 SORT1Q99523 831 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 SH3GL2Q99962 352 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 DEFB126Q9BYW3 111 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 CDCP1Q9H5V8 836 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 LRTM1Q9HBL6 345 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 C1orf109Q9NX04 203 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 NKIRAS1Q9NYS0 192 aa14.21□□□□□ -0.13
UBE3B-201ENST00000340074 DYTNA2CJ06 578 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 HRKO00198 91 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 LSM1O15116 133 aaKnown RBP14.2□□□□□ -0.14
UBE3B-201ENST00000340074 SLC28A2O43868 658 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 PRKNO60260 465 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-201ENST00000340074 SKAP2O75563 359 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-201ENST00000340074 SLC35E2P0CK97 266 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 DRD2P14416 443 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 ST13P50502 369 aaKnown RBP14.2□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF763Q0D2J5 394 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 BST1Q10588 318 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF750Q32MQ0 723 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 NOXRED1Q6NXP6 359 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 FAM180BQ6P0A1 224 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 Q6ZS92 163 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF605Q86T29 641 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 RPS19BP1Q86WX3 136 aaKnown RBP14.2□□□□□ -0.14
UBE3B-201ENST00000340074 CDC26Q8NHZ8 85 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 FAM76AQ8TAV0 307 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF721Q8TF20 911 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 HAS2Q92819 552 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 RIT1Q92963 219 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 KLHL29Q96CT2 875 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 METTL2AQ96IZ6 378 aaKnown RBP14.2□□□□□ -0.14
UBE3B-201ENST00000340074 PELOQ9BRX2 385 aaKnown RBP14.2□□□□□ -0.14
UBE3B-201ENST00000340074 ILKAPQ9H0C8 392 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-201ENST00000340074 EPN3Q9H201 632 aa14.2□□□□□ -0.14
UBE3B-201ENST00000340074 SHANK1Q9Y566 2161 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 DYRK3O43781 588 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 ERAL1O75616 437 aaKnown RBP14.19□□□□□ -0.14
UBE3B-201ENST00000340074 SASH3O75995 380 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 ZFAND5O76080 213 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms