RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 MCFD2Q8NI22 146 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 RASSF5Q8WWW0 418 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 DTD2Q96FN9 168 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 PDXPQ96GD0 296 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 MRGPRX1Q96LB2 322 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 COQ10AQ96MF6 247 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 PIP5K1AQ99755 562 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 SLC6A17Q9H1V8 727 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 ABCG8Q9H221 673 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 RUBCNLQ9H714 662 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 NEUROD4Q9HD90 331 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 A4GALTQ9NPC4 353 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 FZD3Q9NPG1 666 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 CD93Q9NPY3 652 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 GPATCH2Q9NW75 528 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 TAS2R9Q9NYW1 312 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 GULP1Q9UBP9 304 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 IL36AQ9UHA7 158 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 SLCO3A1Q9UIG8 710 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 CYP8B1Q9UNU6 501 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 GPR34Q9UPC5 381 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 CFL2Q9Y281 166 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 PEX16Q9Y5Y5 336 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 STON1Q9Y6Q2 735 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 TNRC6BQ9UPQ9 1833 aaKnown RBP10.26□□□□□ -0.77
RTN3-201ENST00000338850 PIPSLA2A3N6 862 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 AGAP5A6NIR3 686 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 ZAR1LA6NP61 321 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 H3BM21 787 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 BOLA2-SMG1P6H3BVE0 249 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 SLITRK5O94991 958 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 SLC16A8O95907 504 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 CFIP05156 583 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 ADORA3P0DMS8 318 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 CYP4B1P13584 511 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 CEACAM1P13688 526 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 UQCRC2P22695 453 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 FRKP42685 505 aaPredicted RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 IL12RB1P42701 662 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 SLC15A1P46059 708 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 CDC42P60953 191 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 NCS1P62166 190 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 RPS13P62277 151 aaKnown RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 SNRPGP62308 76 aaKnown RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 TBPL1P62380 186 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 CDK6Q00534 326 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 RHAGQ02094 409 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 TMEM115Q12893 351 aaPredicted RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 PPP1R8Q12972 351 aaKnown RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 MLC1Q15049 377 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 TIGD6Q17RP2 521 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 UAP1L1Q3KQV9 507 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 ZNF385BQ569K4 471 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 LIPIQ6XZB0 460 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 Q6ZVL8 140 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 COMMD6Q7Z4G1 85 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 TRIM74Q86UV6 250 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 TRIM73Q86UV7 250 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 LGI4Q8N135 537 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 NAGSQ8N159 534 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 OR9A1PQ8NGU1 263 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 CEP76Q8TAP6 659 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 C16orf78Q8WTQ4 265 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 ZNF480Q8WV37 535 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 APOBEC4Q8WW27 367 aaKnown RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 SLC5A11Q8WWX8 675 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 GGHQ92820 318 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 PPCDCQ96CD2 204 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 TXNDC15Q96J42 360 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 MTERF1Q99551 399 aaKnown RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 FEVQ99581 238 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 DPH2Q9BQC3 489 aaPredicted RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 SLC35A5Q9BS91 424 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 CCDC32Q9BV29 185 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 RIOK2Q9BVS4 552 aaKnown RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 RHBGQ9H310 441 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 SYNDIG1Q9H7V2 258 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 ZNF556Q9HAH1 456 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 PELI2Q9HAT8 420 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 CAPN10Q9HC96 672 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 CCDC177Q9NQR7 707 aaPredicted RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 FSCN3Q9NQT6 498 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 EXD2Q9NVH0 621 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 TRNAU1APQ9NX07 287 aaKnown RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 AHSPQ9NZD4 102 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 SCHIP1Q9P0W5 487 aaPredicted RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 ANKMY1Q9P2S6 941 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 THAP10Q9P2Z0 257 aaPredicted RBP10.25□□□□□ -0.77
RTN3-201ENST00000338850 FTSJ1Q9UET6 329 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 ADAM29Q9UKF5 820 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 SLC6A14Q9UN76 642 aa10.25□□□□□ -0.77
RTN3-201ENST00000338850 ASCC3Q8N3C0 2202 aaKnown RBP10.24□□□□□ -0.77
RTN3-201ENST00000338850 GNG14A0A1W2PPG7 69 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 AQP9O43315 295 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 VEGFDO43915 354 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 LEFTY1O75610 366 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 CCNB2O95067 398 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 PRNPP04156 253 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 LCKP06239 509 aa10.24□□□□□ -0.77
RTN3-201ENST00000338850 NUDT7P0C024 238 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms