RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RGNQ15493 299 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SPATA24Q86W54 205 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SPPL2CQ8IUH8 684 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PYDC1Q8WXC3 89 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 LRGUKQ96M69 825 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 OR6C1Q96RD1 312 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NDC1Q9BTX1 674 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RBCK1Q9BYM8 510 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PRDM9Q9NQV7 894 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ACTR3BQ9P1U1 418 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NCDNQ9UBB6 729 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CORO2BQ9UQ03 480 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SNX13Q9Y5W8 968 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GMEB1Q9Y692 573 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MAU2Q9Y6X3 613 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RNF103-CHMP3A0A140T963 221 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ELOVL7A1L3X0 281 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 C4orf47A7E2U8 309 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FAM220BPB1ANY3 271 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 H0YIG0 161 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FGF17O60258 216 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GCGRP47871 477 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MVDP53602 400 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FXNQ16595 210 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CYP51A1Q16850 503 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SPDYE7PQ495Y7 208 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 COX20Q5RI15 118 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GLYATQ6IB77 296 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 B3GNT8Q7Z7M8 397 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SERPINA11Q86U17 422 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MICU2Q8IYU8 434 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PSMA8Q8TAA3 256 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TANKQ92844 425 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RNF31Q96EP0 1072 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MUC13Q9H3R2 512 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 DCLRE1BQ9H816 532 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PARD6AQ9NPB6 346 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GPATCH2Q9NW75 528 aa13.88□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MYOCOSA0A1B0GUC4 107 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GSTA4O15217 222 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 HYAL3O43820 417 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 KCNK5O95279 499 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 LMNAP02545 664 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CRATP43155 626 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 OR1D4P47884 311 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CCT3P49368 545 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ARSFP54793 590 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MRPS22P82650 360 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ERV3-1Q14264 604 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RCN1Q15293 331 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CSRP2Q16527 193 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 LCN8Q6JVE9 175 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RNF130Q86XS8 419 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SAMD14Q8IZD0 417 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 LRRC25Q8N386 305 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TNIP2Q8NFZ5 429 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 OR52N2Q8NGI0 321 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 OR9A2Q8NGT5 310 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 COL26A1Q96A83 441 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 REXO5Q96IC2 774 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MAGED4Q96JG8 741 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 EPS8L2Q9H6S3 715 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RNPEPL1Q9HAU8 725 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CLK4Q9HAZ1 481 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 S100A14Q9HCY8 104 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NKX1-2Q9UD57 310 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RAPGEFL1Q9UHV5 662 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MAP4K5Q9Y4K4 846 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 B4GALT2O60909 372 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CBFA2T3O75081 653 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FKBP6O75344 327 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 KRT75O95678 551 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GPR75O95800 540 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NUDT7P0C024 238 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CPMP14384 443 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GGT1P19440 569 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 C16orf72Q14CZ0 275 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 AASDHQ4L235 1098 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CCDC157Q569K6 752 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SAXO2Q658L1 398 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SZRD1Q7Z422 152 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PROSER1Q86XN7 944 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ADCY4Q8NFM4 1077 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 OR51Q1Q8NH59 317 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FIG4Q92562 907 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ANKRD9Q96BM1 317 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MVB12AQ96EY5 273 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RSRC1Q96IZ7 334 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 DPH2Q9BQC3 489 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 YIPF2Q9BWQ6 316 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TRIM15Q9C019 465 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CHST8Q9H2A9 424 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SEMA3GQ9NS98 782 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 OCIAD1Q9NX40 245 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SIDT1Q9NXL6 827 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MAGEL2Q9UJ55 1249 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RARRES3Q9UL19 164 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms