RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 HPCAL1P37235 193 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 FRKP42685 505 aaPredicted RBP16.4■□□□□ 0.22
CHGA-202ENST00000334654 XKP51811 444 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 ACTN3Q08043 901 aaPredicted RBP16.4■□□□□ 0.22
CHGA-202ENST00000334654 IL10RAQ13651 578 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 UBAP2LQ14157 1087 aaKnown RBP16.4■□□□□ 0.22
CHGA-202ENST00000334654 SSPNQ14714 243 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 NSDHLQ15738 373 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 GKAP1Q5VSY0 366 aaPredicted RBP16.4■□□□□ 0.22
CHGA-202ENST00000334654 FAAH2Q6GMR7 532 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 R3HCC1LQ7Z5L2 792 aaKnown RBP16.4■□□□□ 0.22
CHGA-202ENST00000334654 MTDHQ86UE4 582 aaKnown RBP16.4■□□□□ 0.22
CHGA-202ENST00000334654 SUN3Q8TAQ9 357 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 ADAMTS17Q8TE56 1095 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 KCNE4Q8WWG9 221 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 PPCDCQ96CD2 204 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 KLHL29Q96CT2 875 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 SEMA3GQ9NS98 782 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 SH3BP4Q9P0V3 963 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 PSME2Q9UL46 239 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 HS3ST3B1Q9Y662 390 aa16.4■□□□□ 0.22
CHGA-202ENST00000334654 ANKRD11Q6UB99 2663 aaPredicted RBP16.39■□□□□ 0.21
CHGA-202ENST00000334654 LOC102723996A0A087X1L8 192 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 MYO1GB0I1T2 1018 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 FCHO1O14526 889 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 CREG1O75629 220 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 COX7A2P14406 83 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 MMP11P24347 488 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 PIK3R1P27986 724 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 RPL3P39023 403 aaKnown RBP16.39■□□□□ 0.21
CHGA-202ENST00000334654 FEN1P39748 380 aaKnown RBP16.39■□□□□ 0.21
CHGA-202ENST00000334654 EIF2S3P41091 472 aaKnown RBP16.39■□□□□ 0.21
CHGA-202ENST00000334654 CLNS1AP54105 237 aaKnown RBP16.39■□□□□ 0.21
CHGA-202ENST00000334654 STX1BP61266 288 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 SPANXN4Q5MJ08 99 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 DGAT2L6Q6ZPD8 337 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 ANKRD37Q7Z713 158 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 AMER2Q8N7J2 671 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 GLB1L3Q8NCI6 653 aaPredicted RBP16.39■□□□□ 0.21
CHGA-202ENST00000334654 OR8J2Q8NGG1 315 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 CIDECQ96AQ7 238 aaPredicted RBP16.39■□□□□ 0.21
CHGA-202ENST00000334654 KIAA1143Q96AT1 154 aaPredicted RBP16.39■□□□□ 0.21
CHGA-202ENST00000334654 DPH1Q9BZG8 443 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 MAPRE3Q9UPY8 281 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 ERVK-11Q9UQG0 969 aa16.39■□□□□ 0.21
CHGA-202ENST00000334654 TAF4O00268 1085 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 SOCS6O14544 535 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 NDUFAB1O14561 156 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 SLC35E2P0CK97 266 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 CPMP14384 443 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 PORP16435 677 aaPredicted RBP16.38■□□□□ 0.21
CHGA-202ENST00000334654 DGKQP52824 942 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 SRSF11Q05519 484 aaKnown RBP16.38■□□□□ 0.21
CHGA-202ENST00000334654 STX4Q12846 297 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 KLF10Q13118 480 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 SERTAD2Q14140 314 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 FAM174BQ3ZCQ3 159 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 AGKQ53H12 422 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 CPTPQ5TA50 214 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 OR4F3Q6IEY1 312 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 BLOC1S3Q6QNY0 202 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 UNQ6494/PRO21346Q6UXR6 183 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 PPP1R32Q7Z5V6 425 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 PPWD1Q96BP3 646 aaKnown RBP16.38■□□□□ 0.21
CHGA-202ENST00000334654 C8orf44Q96CB5 159 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 WDR77Q9BQA1 342 aaPredicted RBP16.38■□□□□ 0.21
CHGA-202ENST00000334654 CCDC106Q9BWC9 280 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 TMEM45AQ9NWC5 275 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 CCDC167Q9P0B6 97 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 ARMCX1Q9P291 453 aa16.38■□□□□ 0.21
CHGA-202ENST00000334654 A0A1W2PQ72 361 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 FAM234BA2RU67 622 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 CSNK2A2P19784 350 aaPredicted RBP16.37■□□□□ 0.21
CHGA-202ENST00000334654 STT3AP46977 705 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 POLR2JP52435 117 aaKnown RBP16.37■□□□□ 0.21
CHGA-202ENST00000334654 BIKQ13323 160 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 RCAN2Q14206 197 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 DPY19L1Q2PZI1 675 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 PGS1Q32NB8 556 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 KIRREL2Q6UWL6 708 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 CCDC116Q8IYX3 515 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 ST13P4Q8IZP2 240 aaPredicted RBP16.37■□□□□ 0.21
CHGA-202ENST00000334654 CCDC197Q8NCU1 140 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 STARD8Q92502 1023 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 AMDHD1Q96NU7 426 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 PRPF18Q99633 342 aaKnown RBP16.37■□□□□ 0.21
CHGA-202ENST00000334654 EFHD1Q9BUP0 239 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 DUSP26Q9BV47 211 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 BHLHE41Q9C0J9 482 aaPredicted RBP16.37■□□□□ 0.21
CHGA-202ENST00000334654 GLIPR2Q9H4G4 154 aa16.37■□□□□ 0.21
CHGA-202ENST00000334654 IGHV3-20A0A0C4DH32 117 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 KLK10O43240 276 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 CCDC22O60826 627 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 IGHEP01854 428 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 ATP1B1P05026 303 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 PGRP06401 933 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 EFNA1P20827 205 aaPredicted RBP16.36■□□□□ 0.21
CHGA-202ENST00000334654 ADSLP30566 484 aaPredicted RBP16.36■□□□□ 0.21
CHGA-202ENST00000334654 PTGER1P34995 402 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 MGAT2Q10469 447 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms