RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CARM1Q86X55 608 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 PRAP1Q96NZ9 151 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 PCED1AQ9H1Q7 454 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TM9SF3Q9HD45 589 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 AIG1Q9NVV5 245 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 ERVK13-1Q9NX77 482 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 MAPRE3Q9UPY8 281 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 CNOT1A5YKK6 2376 aaKnown RBP11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TCRBV3S1A0A5B6 114 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 IFNA16P05015 189 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 ARNTP27540 789 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 PRDX3P30048 256 aaKnown RBP11.26□□□□□ -0.61
HDAC6-201ENST00000334136 HTR6P50406 440 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 BNC1Q01954 994 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 MVKQ03426 396 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 CLCA4Q14CN2 919 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 IER5LQ5T953 404 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TMIGD1Q6UXZ0 262 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 FRMD1Q8N878 549 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TTLQ8NG68 377 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 OR5AK3PQ8NH89 298 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 GRPEL2Q8TAA5 225 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 PTERQ96BW5 349 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 HSH2DQ96JZ2 352 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TGM7Q96PF1 710 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 SLC38A2Q96QD8 506 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 PKP4Q99569 1192 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 MCUBQ9NWR8 336 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TSPAN4O14817 238 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 ZNF821O75541 412 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-201ENST00000334136 DHFRP00374 187 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 LCKP06239 509 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 FPR1P21462 350 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 ATP4BP51164 291 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 EMX2Q04743 252 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 RAPSNQ13702 412 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 GTDC1Q4AE62 458 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 IQCCQ4KMZ1 466 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 TMEM164Q5U3C3 297 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 KIAA1614Q5VZ46 1190 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 PLEKHG7Q6ZR37 379 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 NLRP8Q86W28 1048 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 GHDCQ8N2G8 530 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 CADM4Q8NFZ8 388 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 NDNFQ8TB73 568 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 POP5Q969H6 163 aaKnown RBP11.25□□□□□ -0.61
HDAC6-201ENST00000334136 GSTO2Q9H4Y5 243 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 EPHX3Q9H6B9 360 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 AGPAT4Q9NRZ5 378 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 SEMA3GQ9NS98 782 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 SPIN1Q9Y657 262 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-201ENST00000334136 FAM86C2PA6NEL3 165 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 SOX14O95416 240 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 PROS1P07225 676 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 POLR2IP36954 125 aaKnown RBP11.25□□□□□ -0.61
HDAC6-201ENST00000334136 TBRG1Q3YBR2 411 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 IFI44LQ53G44 452 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 ATAD3BQ5T9A4 648 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 UBE2UQ5VVX9 321 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 EID2Q8N6I1 236 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 DUSP26Q9BV47 211 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 PAQR5Q9NXK6 330 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-201ENST00000334136 CPNE7Q9UBL6 633 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 HSPB11Q9Y547 144 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 M0QX08 132 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 ACOT8O14734 319 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 SLC30A4O14863 429 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 STX11O75558 287 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 PDGFBP01127 241 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-201ENST00000334136 CD9P21926 228 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 GSTM2P28161 218 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 CNR2P34972 360 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 TBPL1P62380 186 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 TUBB3Q13509 450 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 GCNT6Q5T4J0 391 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 LCN1P1Q5VSP4 162 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 TNFAIP8L2Q6P589 184 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-201ENST00000334136 SPARTQ8N0X7 666 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 LSMEM2Q8N112 164 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 SH3YL1Q96HL8 342 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-201ENST00000334136 DPYSL5Q9BPU6 564 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 SLC30A2Q9BRI3 323 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 LGR4Q9BXB1 951 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 TM7SF3Q9NS93 570 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 IGSF5Q9NSI5 407 aa11.25□□□□□ -0.61
HDAC6-201ENST00000334136 GPN3Q9UHW5 284 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-201ENST00000334136 CCNB2O95067 398 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 TGFB1P01137 390 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 GBAP04062 536 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 HOXB6P17509 224 aaKnown RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ST3GAL4Q11206 333 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 HKDC1Q2TB90 917 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 DCST1Q5T197 706 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 FRG2Q64ET8 278 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ASB18Q6ZVZ8 466 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 CDK20Q8IZL9 346 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 CAMKVQ8NCB2 501 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 TEX47Q8TBZ9 253 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 FAM110BQ8TC76 370 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 LKAAEAR1Q8TD35 194 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms