RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 ZFP90Q8TF47 636 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 GFM1Q96RP9 751 aaKnown RBP21.92■■□□□ 1.1
TSEN54-201ENST00000333213 GLIPR2Q9H4G4 154 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 RPF2Q9H7B2 306 aaKnown RBP21.92■■□□□ 1.1
TSEN54-201ENST00000333213 CXorf36Q9H7Y0 433 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 GPATCH2Q9NW75 528 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 D6RAR5 112 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 HYAL3O43820 417 aaPredicted RBP21.92■■□□□ 1.1
TSEN54-201ENST00000333213 CBFA2T3O75081 653 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 NSA2O95478 260 aaKnown RBP21.92■■□□□ 1.1
TSEN54-201ENST00000333213 TGM1P22735 817 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 GSTT1P30711 240 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 PTGER1P34995 402 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 SOX11P35716 441 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 GZMMP51124 257 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 POLE2P56282 527 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 NDUFA9Q16795 377 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 TMTC4Q5T4D3 741 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 UGT2A3Q6UWM9 527 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 B3GNT8Q7Z7M8 397 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 METTL27Q8N6F8 245 aaPredicted RBP21.92■■□□□ 1.1
TSEN54-201ENST00000333213 AMDHD1Q96NU7 426 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 NPLQ9BXD5 320 aaPredicted RBP21.92■■□□□ 1.1
TSEN54-201ENST00000333213 TMEM121BQ9BXQ6 578 aaPredicted RBP21.92■■□□□ 1.1
TSEN54-201ENST00000333213 TPT1P8Q9HAU6 139 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 SIRT3Q9NTG7 399 aaPredicted RBP21.92■■□□□ 1.1
TSEN54-201ENST00000333213 MS4A12Q9NXJ0 267 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 EGFL7Q9UHF1 273 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 ACSL6Q9UKU0 697 aa21.92■■□□□ 1.1
TSEN54-201ENST00000333213 CHST10O43529 356 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 HSPA13P48723 471 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 MANFP55145 182 aaKnown RBP21.91■■□□□ 1.1
TSEN54-201ENST00000333213 OR4D2P58180 307 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 MAT1AQ00266 395 aaKnown RBP21.91■■□□□ 1.1
TSEN54-201ENST00000333213 CEBPEQ15744 281 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 SYT16Q17RD7 645 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 NATD1Q8N6N6 113 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 PNPT1Q8TCS8 783 aaKnown RBP21.91■■□□□ 1.1
TSEN54-201ENST00000333213 OR5P2Q8WZ92 322 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 ACSS1Q9NUB1 689 aaPredicted RBP21.91■■□□□ 1.1
TSEN54-201ENST00000333213 FTSJ1Q9UET6 329 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 VPS4AQ9UN37 437 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 PCDHGB4Q9UN71 923 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 SCN2AQ99250 2005 aa21.91■■□□□ 1.1
TSEN54-201ENST00000333213 MYO1GB0I1T2 1018 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 BCAS2O75934 225 aaPredicted RBP21.9■■□□□ 1.1
TSEN54-201ENST00000333213 GP1BAP07359 652 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 FEN1P39748 380 aaKnown RBP21.9■■□□□ 1.1
TSEN54-201ENST00000333213 CDK9P50750 372 aaKnown RBP21.9■■□□□ 1.1
TSEN54-201ENST00000333213 PDX1P52945 283 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 EMP3P54852 163 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 FOLH1Q04609 750 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 HSPB3Q12988 150 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 NAXDQ8IW45 347 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 OR4N5Q8IXE1 308 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 TTC29Q8NA56 475 aaPredicted RBP21.9■■□□□ 1.1
TSEN54-201ENST00000333213 HIPK4Q8NE63 616 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 OR5AK3PQ8NH89 298 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 ZBED6CLQ96FA7 236 aaPredicted RBP21.9■■□□□ 1.1
TSEN54-201ENST00000333213 DPYSL5Q9BPU6 564 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 TMEM9BQ9NQ34 198 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 CUTCQ9NTM9 273 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 HCN3Q9P1Z3 774 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 DHCR7Q9UBM7 475 aaKnown RBP21.9■■□□□ 1.1
TSEN54-201ENST00000333213 ZNF282Q9UDV7 671 aaPredicted RBP21.9■■□□□ 1.1
TSEN54-201ENST00000333213 GMEB1Q9Y692 573 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 ZNF749O43361 778 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 MVDP53602 400 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 MLC1Q15049 377 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 FXNQ16595 210 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 TTLL10Q6ZVT0 673 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 CALHM3Q86XJ0 350 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 CCDC116Q8IYX3 515 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 SH3GL1Q99961 368 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 KCTD14Q9BQ13 255 aaPredicted RBP21.9■■□□□ 1.1
TSEN54-201ENST00000333213 CUL9Q8IWT3 2517 aa21.9■■□□□ 1.1
TSEN54-201ENST00000333213 B4GALT2O60909 372 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 NTRK1P04629 796 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 GPX2P18283 190 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 ITGA1P56199 1179 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 ZFP36L1Q07352 338 aaKnown RBP21.89■■□□□ 1.09
TSEN54-201ENST00000333213 FLOT2Q14254 428 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 CSRP2Q16527 193 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 LRRC36Q1X8D7 754 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 GRAMD1BQ3KR37 738 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 SPATS1Q496A3 300 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 PSMA8Q8TAA3 256 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 RNF31Q96EP0 1072 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 MMABQ96EY8 250 aaPredicted RBP21.89■■□□□ 1.09
TSEN54-201ENST00000333213 SLC35A5Q9BS91 424 aa21.89■■□□□ 1.09
TSEN54-201ENST00000333213 SIDT1Q9NXL6 827 aaKnown RBP21.89■■□□□ 1.09
TSEN54-201ENST00000333213 CNOT11Q9UKZ1 510 aaKnown RBP21.89■■□□□ 1.09
TSEN54-201ENST00000333213 COL27A1Q8IZC6 1860 aaPredicted RBP21.89■■□□□ 1.09
TSEN54-201ENST00000333213 C4orf47A7E2U8 309 aa21.88■■□□□ 1.09
TSEN54-201ENST00000333213 GDF9O60383 454 aa21.88■■□□□ 1.09
TSEN54-201ENST00000333213 LDB3O75112 727 aa21.88■■□□□ 1.09
TSEN54-201ENST00000333213 TLX1P31314 330 aaPredicted RBP21.88■■□□□ 1.09
TSEN54-201ENST00000333213 NCBP2P52298 156 aaKnown RBP eCLIP21.88■■□□□ 1.09
TSEN54-201ENST00000333213 RAB38P57729 211 aa21.88■■□□□ 1.09
TSEN54-201ENST00000333213 CLPPQ16740 277 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms