RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 TMEM145Q8NBT3 493 aa16.49■□□□□ 0.23
DDX28-201ENST00000332395 CHPT1Q8WUD6 406 aa16.49■□□□□ 0.23
DDX28-201ENST00000332395 APOBEC4Q8WW27 367 aaKnown RBP16.49■□□□□ 0.23
DDX28-201ENST00000332395 TANKQ92844 425 aa16.49■□□□□ 0.23
DDX28-201ENST00000332395 MS4A6EQ96DS6 147 aa16.49■□□□□ 0.23
DDX28-201ENST00000332395 OR2M4Q96R27 311 aa16.49■□□□□ 0.23
DDX28-201ENST00000332395 EHD3Q9NZN3 535 aa16.49■□□□□ 0.23
DDX28-201ENST00000332395 SELENONQ9NZV5 590 aa16.49■□□□□ 0.23
DDX28-201ENST00000332395 PCDHGA2Q9Y5H1 932 aa16.49■□□□□ 0.23
DDX28-201ENST00000332395 PCDH17O14917 1159 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 ERI3O43414 337 aaKnown RBP16.48■□□□□ 0.23
DDX28-201ENST00000332395 GADD45GO95257 159 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 MT-ND2P03891 347 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 FUT4P22083 530 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 MASP1P48740 699 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 SLC9A5Q14940 896 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 MAPK11Q15759 364 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 ADPRMQ3LIE5 342 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 ANKRD13BQ86YJ7 626 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 PHF10Q8WUB8 498 aaKnown RBP16.48■□□□□ 0.23
DDX28-201ENST00000332395 JPH3Q8WXH2 748 aaPredicted RBP16.48■□□□□ 0.23
DDX28-201ENST00000332395 RIPOR3Q96MK2 946 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 AMDHD1Q96NU7 426 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 FAIM2Q9BWQ8 316 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 GLIPR2Q9H4G4 154 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 SERHL2Q9H4I8 314 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 HEBP2Q9Y5Z4 205 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 MYO10Q9HD67 2058 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 WASHC1A8K0Z3 465 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 MRPS14O60783 128 aaKnown RBP16.48■□□□□ 0.23
DDX28-201ENST00000332395 PRKRAO75569 313 aaKnown RBP16.48■□□□□ 0.23
DDX28-201ENST00000332395 MFN2O95140 757 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 BCL10O95999 233 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 AHRP35869 848 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 CLDN2P57739 230 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 LRRC32Q14392 662 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 WASH2PQ6VEQ5 465 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 CCDC81Q6ZN84 652 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 SZRD1Q7Z422 152 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 P3H2Q8IVL5 708 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 OR8K5Q8NH50 307 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 IPCEF1Q8WWN9 437 aaPredicted RBP16.48■□□□□ 0.23
DDX28-201ENST00000332395 SIPA1Q96FS4 1042 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 PSD2Q9BQI7 771 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 KIR3DX1Q9H7L2 352 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 ZNF556Q9HAH1 456 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 SLC35C2Q9NQQ7 365 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 TBC1D29Q9UFV1 150 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 SCML1Q9UN30 329 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 DOLKQ9UPQ8 538 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 HCN4Q9Y3Q4 1203 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 COLEC10Q9Y6Z7 277 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 SPTBN5Q9NRC6 3674 aaKnown RBP16.48■□□□□ 0.23
DDX28-201ENST00000332395 F5P12259 2224 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 CEP290O15078 2479 aa16.48■□□□□ 0.23
DDX28-201ENST00000332395 SNRNP200O75643 2136 aaKnown RBP16.47■□□□□ 0.23
DDX28-201ENST00000332395 KDM1AO60341 852 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 PDE9AO76083 593 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 FADS2O95864 444 aaKnown RBP16.47■□□□□ 0.23
DDX28-201ENST00000332395 HIST1H1TP22492 207 aaPredicted RBP16.47■□□□□ 0.23
DDX28-201ENST00000332395 NR4A1P22736 598 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 GPC1P35052 558 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 BMXP51813 675 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 SLAMF1Q13291 335 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 AQP6Q13520 282 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 TCEA2Q15560 299 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ABHD17CQ6PCB6 329 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 C16orf87Q6PH81 154 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 AHSA2Q719I0 299 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 PRSS48Q7RTY5 328 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 SVOPQ8N4V2 548 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 GPR32P1Q8NGA4 272 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 DNASE1L2Q92874 299 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ITPKCQ96DU7 683 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 SARGQ9BW04 601 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 RSPO3Q9BXY4 272 aaPredicted RBP16.47■□□□□ 0.23
DDX28-201ENST00000332395 PRDM7Q9NQW5 492 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 RHCGQ9UBD6 479 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 KCND3Q9UK17 655 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ZNF232Q9UNY5 417 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 GLOD5A6NK44 160 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 MAN2B1O00754 1011 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 BCAS1O75363 584 aaPredicted RBP16.47■□□□□ 0.23
DDX28-201ENST00000332395 CCNB2O95067 398 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 CD72P21854 359 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ACVR2AP27037 513 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 CMPK1P30085 196 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 NCBP2P52298 156 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDX28-201ENST00000332395 LIM2P55344 173 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 KIAA1024LP59773 190 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 CSNK2BP67870 215 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 NIPAL1Q6NVV3 410 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 TBC1D19Q8N5T2 526 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ACOT4Q8N9L9 421 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 OR2L5Q8NG80 312 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ASB12Q8WXK4 309 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 OR1E3Q8WZA6 343 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 PROX1Q92786 737 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 SLC35G5Q96KT7 338 aa16.47■□□□□ 0.23
DDX28-201ENST00000332395 ALPK1Q96QP1 1244 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms