RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 CPSF6Q16630 551 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■□□□□ 10.4
RAB28-202ENST00000330852 SPRED3Q2MJR0 410 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 TSNAXIP1Q2TAA8 658 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 ZNF750Q32MQ0 723 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 CYP20A1Q6UW02 462 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 MMGT1Q8N4V1 131 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 WDR20Q8TBZ3 569 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 SLC44A1Q8WWI5 657 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 SDCCAG3Q96C92 435 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 SERPINI1Q99574 410 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 SORBS1Q9BX66 1292 aaKnown RBP16.76■□□□□ 0.27
RAB28-202ENST00000330852 ZNF717Q9BY31 904 aaPredicted RBP16.76■□□□□ 0.27
RAB28-202ENST00000330852 TTTY12Q9BZ98 90 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 VPS11Q9H270 941 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 CPSF2Q9P2I0 782 aaKnown RBP16.76■□□□□ 0.27
RAB28-202ENST00000330852 ASB4Q9Y574 426 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 IKBKGQ9Y6K9 419 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 NINQ8N4C6 2090 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 A0A0A6YYD5 115 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 STX16-NPEPL1H3BU86 382 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 STX16O14662 325 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 ZNHIT1O43257 154 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 URI1O94763 535 aaPredicted RBP16.75■□□□□ 0.27
RAB28-202ENST00000330852 IGHG3P01860 377 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 SSTR2P30874 369 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 MAGEA12P43365 314 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 C18orf63Q68DL7 685 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 NUDT13Q86X67 352 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 OR4N5Q8IXE1 308 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 FAM109AQ8N4B1 249 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 RNF175Q8N4F7 328 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 MNS1Q8NEH6 495 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 NTMT1Q9BV86 223 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 DEFB127Q9H1M4 99 aa16.75■□□□□ 0.27
RAB28-202ENST00000330852 IQANK1A0A1B0GTG1 560 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 OR6C76A6NM76 312 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 BCKDKO14874 412 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 KRT38O76015 456 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 FAM58BPP0C7Q3 252 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 NR2F6P10588 404 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 ELAVL4P26378 380 aaKnown RBP16.74■□□□□ 0.27
RAB28-202ENST00000330852 ASPHQ12797 758 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 CDSNQ15517 529 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 ZNF791Q3KP31 576 aaPredicted RBP16.74■□□□□ 0.27
RAB28-202ENST00000330852 SLC22A10Q63ZE4 541 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 C3P1Q6ZMU1 363 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 FAM47EQ6ZV65 393 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 ACAD11Q709F0 780 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 SLC29A4Q7RTT9 530 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 ACBD4Q8NC06 268 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 ATP6V1E2Q96A05 226 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 TRIM8Q9BZR9 551 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 ENKD1Q9H0I2 346 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 AHSPQ9NZD4 102 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 RNF11Q9Y3C5 154 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 HCFC1P51610 2035 aa16.74■□□□□ 0.27
RAB28-202ENST00000330852 A0A1B0GVC2 190 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 PINLYPA6NC86 204 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 SUSD5O60279 629 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 OR10H2O60403 315 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 SMIM24O75264 130 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 PDE9AO76083 593 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 SIX3O95343 332 aaPredicted RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 CCNG1P51959 295 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 GLE1Q53GS7 698 aaKnown RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 C9orf40Q8IXQ3 194 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 PTGR2Q8N8N7 351 aaPredicted RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 RND1Q92730 232 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 RIT1Q92963 219 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 PPWD1Q96BP3 646 aaKnown RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 C14orf79Q96F83 325 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 FMO2Q99518 471 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 CDC42EP4Q9H3Q1 356 aaKnown RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 NOL11Q9H8H0 719 aaKnown RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 CNIH4Q9P003 139 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 ZNF180Q9UJW8 692 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 ADAM29Q9UKF5 820 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 INTS1Q8N201 2190 aaKnown RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 A0A1W2PR48 441 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 LRRC14BA6NHZ5 514 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 ZNF354AO60765 605 aaPredicted RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 EEDO75530 441 aaKnown RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 SLC35E2P0CK97 266 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 CHRNB4P30926 498 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 FOXO1Q12778 655 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 SLC10A1Q14973 349 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 FRG2Q64ET8 278 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 RNF111Q6ZNA4 994 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 NCCRP1Q6ZVX7 275 aaPredicted RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 PLD6Q8N2A8 252 aaKnown RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 TMEM251Q8N6I4 163 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 PAQR8Q8TEZ7 354 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 SPACA9Q96E40 222 aaPredicted RBP16.73■□□□□ 0.27
RAB28-202ENST00000330852 FRG2BQ96QU4 278 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 SH2D2AQ9NP31 389 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 HRH3Q9Y5N1 445 aa16.73■□□□□ 0.27
RAB28-202ENST00000330852 FAM166BA8MTA8 275 aa16.72■□□□□ 0.27
RAB28-202ENST00000330852 OR7A17O14581 309 aa16.72■□□□□ 0.27
RAB28-202ENST00000330852 CTIFO43310 598 aaKnown RBP16.72■□□□□ 0.27
RAB28-202ENST00000330852 TMPRSS11DO60235 418 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms