RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 KRT75O95678 551 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 ELK4P28324 431 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 POLR2IP36954 125 aaKnown RBP19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 COL9A2Q14055 689 aaPredicted RBP19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 FKBP9P1Q75LS8 142 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 EID3Q8N140 333 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 CAMKVQ8NCB2 501 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 C11orf65Q8NCR3 313 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 ZCCHC10Q8TBK6 192 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 MAGIXQ9H6Y5 334 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 PLGRKTQ9HBL7 147 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 UCKL1Q9NWZ5 548 aa19.17■□□□□ 0.66
RIPPLY3-201ENST00000329553 THADAQ6YHU6 1953 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 UBXN7O94888 489 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 ZNF682O95780 498 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 EIF2S1P05198 315 aaKnown RBP19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 JUNBP17275 347 aaPredicted RBP19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 FADDQ13158 208 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 KLHL35Q6PF15 583 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 MAMSTRQ6ZN01 415 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 RNF44Q7L0R7 432 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 STK32CQ86UX6 486 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 GLIPR2Q9H4G4 154 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 TMEM9Q9P0T7 183 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 DNAJB9Q9UBS3 223 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 SAMD4AQ9UPU9 718 aaKnown RBP19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 LMO7DNF2Z398 122 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 GCM2O75603 506 aaPredicted RBP19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 ST6GAL1P15907 406 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 PCGF2P35227 344 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 ENTPD1P49961 510 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 MLC1Q15049 377 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 C17orf82Q86X59 251 aaPredicted RBP19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 ZDHHC13Q8IUH4 622 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 OR13F1Q8NGS4 319 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 AMDHD1Q96NU7 426 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 IER2Q9BTL4 223 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 NEUROD4Q9HD90 331 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 CES1P1Q9UKY3 287 aa19.16■□□□□ 0.66
RIPPLY3-201ENST00000329553 G3V2T6 193 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 TMX2-CTNND1H3BSU7 103 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 B4GALT2O60909 372 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 ERAL1O75616 437 aaKnown RBP19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 CRYBA2P53672 197 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 C21orf59P57076 290 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 VAC14Q08AM6 782 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 ZNF750Q32MQ0 723 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 DEFB134Q4QY38 66 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 WDR45BQ5MNZ6 344 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 GCNT6Q5T4J0 391 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 POP5Q969H6 163 aaKnown RBP19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 RERGQ96A58 199 aaPredicted RBP19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 SEMA6CQ9H3T2 930 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 FAM60AQ9NP50 221 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 B4GAT1O43505 415 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 HCRTR1O43613 425 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 DNAJB6O75190 326 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 AQP1P29972 269 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 RANBP1P43487 201 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 FNTBP49356 437 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 AFF3P51826 1226 aaKnown RBP19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 ZXDAP98168 799 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 SUZ12Q15022 739 aaKnown RBP19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 NEDD8Q15843 81 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 SAXO2Q658L1 398 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 SLC48A1Q6P1K1 146 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 CBLL1Q75N03 491 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 THAP5Q7Z6K1 395 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 AVL9Q8NBF6 648 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 PSMA8Q8TAA3 256 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 FNDC8Q8TC99 324 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 NEURL3Q96EH8 262 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 CNRIP1Q96F85 164 aaPredicted RBP19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 OSBPL10Q9BXB5 764 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 ASPSCR1Q9BZE9 553 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 NAA50Q9GZZ1 169 aaKnown RBP19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 TOR3AQ9H497 397 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 RAD21L1Q9H4I0 556 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 IL21RQ9HBE5 538 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 LYARQ9NX58 379 aaKnown RBP19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 USE1Q9NZ43 259 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 RPS6KA6Q9UK32 745 aa19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 MRPS2Q9Y399 296 aaKnown RBP19.15■□□□□ 0.66
RIPPLY3-201ENST00000329553 LAMA1P25391 3075 aa19.14■□□□□ 0.66
RIPPLY3-201ENST00000329553 URADA6NGE7 173 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 PIAS2O75928 621 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 CST1P01037 141 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 C9P02748 559 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 PRIM2P49643 509 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 PPP2R2BQ00005 443 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 DUSP2Q05923 314 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 OGFOD3Q6PK18 319 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 BBS4Q96RK4 519 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 SLC38A3Q99624 504 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 TMEM38AQ9H6F2 299 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 UCK1Q9HA47 277 aa19.14■□□□□ 0.65
RIPPLY3-201ENST00000329553 A0A1W2PS29 197 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 CDH3P22223 829 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 NCBP2P52298 156 aaKnown RBP eCLIP19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 RPS26P62854 115 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms