RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 TEX9Q8N6V9 391 aa21.54■■□□□ 1.04
TMEM54-201ENST00000329151 ANKRD9Q96BM1 317 aaPredicted RBP21.54■■□□□ 1.04
TMEM54-201ENST00000329151 TTYH2Q9BSA4 534 aa21.54■■□□□ 1.04
TMEM54-201ENST00000329151 ACTR8Q9H981 624 aa21.54■■□□□ 1.04
TMEM54-201ENST00000329151 ATG4BQ9Y4P1 393 aa21.54■■□□□ 1.04
TMEM54-201ENST00000329151 HCN1O60741 890 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 HOXD4P09016 255 aaPredicted RBP21.53■■□□□ 1.04
TMEM54-201ENST00000329151 GFAPP14136 432 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 CD1EP15812 388 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 ALOX15P16050 662 aaPredicted RBP21.53■■□□□ 1.04
TMEM54-201ENST00000329151 IGFBP2P18065 325 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 ARL1P40616 181 aaPredicted RBP21.53■■□□□ 1.04
TMEM54-201ENST00000329151 TNFRSF17Q02223 184 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 CAV1Q03135 178 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 FOLH1Q04609 750 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 KBTBD12Q3ZCT8 623 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 C1orf185Q5T7R7 199 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 CYP20A1Q6UW02 462 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 RNF111Q6ZNA4 994 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 CMC1Q7Z7K0 106 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 PPWD1Q96BP3 646 aaKnown RBP21.53■■□□□ 1.04
TMEM54-201ENST00000329151 SPACA9Q96E40 222 aaPredicted RBP21.53■■□□□ 1.04
TMEM54-201ENST00000329151 LRRC46Q96FV0 321 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 FBXL20Q96IG2 436 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 JSRP1Q96MG2 331 aaPredicted RBP21.53■■□□□ 1.04
TMEM54-201ENST00000329151 TNFRSF10DQ9UBN6 386 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 PCDHGA11Q9Y5H2 935 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 ARHGAP21Q5T5U3 1957 aa21.53■■□□□ 1.04
TMEM54-201ENST00000329151 A0A1B0GVC2 190 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 GLI4P10075 376 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 GABRA1P14867 456 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 EPORP19235 508 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 SERPINB3P29508 390 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 PIGAP37287 484 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 PIK3CBP42338 1070 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 NR0B1P51843 470 aaKnown RBP21.52■■□□□ 1.04
TMEM54-201ENST00000329151 PLTPP55058 493 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 TFF3Q07654 80 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 NAB1Q13506 487 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 FAM83EQ2M2I3 478 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 SPNS3Q6ZMD2 512 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 WDR53Q7Z5U6 358 aaPredicted RBP21.52■■□□□ 1.04
TMEM54-201ENST00000329151 ISCA2Q86U28 154 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 ST13P4Q8IZP2 240 aaPredicted RBP21.52■■□□□ 1.04
TMEM54-201ENST00000329151 HUS1BQ8NHY5 278 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 UBTD2Q8WUN7 234 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 MTERF1Q99551 399 aaKnown RBP21.52■■□□□ 1.04
TMEM54-201ENST00000329151 SORBS1Q9BX66 1292 aaKnown RBP21.52■■□□□ 1.04
TMEM54-201ENST00000329151 RAB17Q9H0T7 212 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 LYARQ9NX58 379 aaKnown RBP21.52■■□□□ 1.04
TMEM54-201ENST00000329151 CNIH4Q9P003 139 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 ACOT9Q9Y305 439 aa21.52■■□□□ 1.04
TMEM54-201ENST00000329151 FREM3P0C091 2139 aa21.52■■□□□ 1.03
TMEM54-201ENST00000329151 MTORP42345 2549 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 CAPN14A8MX76 684 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 PTX3P26022 381 aaPredicted RBP21.51■■□□□ 1.03
TMEM54-201ENST00000329151 HERVK_113P63132 956 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 ERVK-8P63133 956 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 ZNF267Q14586 743 aaPredicted RBP21.51■■□□□ 1.03
TMEM54-201ENST00000329151 HYAL4Q2M3T9 481 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 SLC25A35Q3KQZ1 300 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 C6orf163Q5TEZ5 329 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 PRAMEF20Q5VT98 475 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 KLC3Q6P597 504 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 CCDC91Q7Z6B0 441 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 C9orf40Q8IXQ3 194 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 TAGAPQ8N103 731 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 ERVK-6Q9BXR3 956 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 ZFP64Q9NPA5 681 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 DMRT3Q9NQL9 472 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 RYDENQ9NUL5 291 aaKnown RBP21.51■■□□□ 1.03
TMEM54-201ENST00000329151 ERVK-19Q9WJR5 959 aa21.51■■□□□ 1.03
TMEM54-201ENST00000329151 A0A087X1B8 175 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 RAD51CO43502 376 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 KLK8O60259 260 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 CELA3AP09093 270 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 SLC35E2BP0CK96 405 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 IGLV3-21P80748 117 aaPredicted RBP21.5■■□□□ 1.03
TMEM54-201ENST00000329151 FOXO1Q12778 655 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 E2F2Q14209 437 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 LIPJQ5W064 366 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 HLA-DQA1Q5Y7H0 255 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 FBXW8Q8N3Y1 598 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 ZCCHC7Q8N3Z6 543 aaKnown RBP21.5■■□□□ 1.03
TMEM54-201ENST00000329151 SPATA4Q8NEY3 305 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 FBF1Q8TES7 1133 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 RIT1Q92963 219 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 ATOH8Q96SQ7 321 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 DOHHQ9BU89 302 aa21.5■■□□□ 1.03
TMEM54-201ENST00000329151 A0A0G2JNJ9 132 aa21.49■■□□□ 1.03
TMEM54-201ENST00000329151 PLPP1O14494 284 aa21.49■■□□□ 1.03
TMEM54-201ENST00000329151 TP53I11O14683 189 aa21.49■■□□□ 1.03
TMEM54-201ENST00000329151 ZNF354AO60765 605 aaPredicted RBP21.49■■□□□ 1.03
TMEM54-201ENST00000329151 FAM155BO75949 473 aa21.49■■□□□ 1.03
TMEM54-201ENST00000329151 NR2F6P10588 404 aa21.49■■□□□ 1.03
TMEM54-201ENST00000329151 MAGEA4P43358 317 aa21.49■■□□□ 1.03
TMEM54-201ENST00000329151 PIK3CGP48736 1102 aa21.49■■□□□ 1.03
TMEM54-201ENST00000329151 ART1P52961 327 aa21.49■■□□□ 1.03
TMEM54-201ENST00000329151 ARFIP1P53367 373 aa21.49■■□□□ 1.03
TMEM54-201ENST00000329151 RPS13P62277 151 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms