RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 INMT-MINDY4F8WBC2 141 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 SAP18O00422 153 aaKnown RBP17.02■□□□□ 0.31
PRKCB-202ENST00000321728 ADAM12O43184 909 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 MPC1LP0DKB6 136 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 ZNF8P17098 575 aaPredicted RBP17.02■□□□□ 0.31
PRKCB-202ENST00000321728 PTPN5P54829 565 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 PCBP3P57721 371 aaKnown RBP17.02■□□□□ 0.31
PRKCB-202ENST00000321728 WDR5P61964 334 aaKnown RBP17.02■□□□□ 0.31
PRKCB-202ENST00000321728 ABATP80404 500 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 PLK5Q496M5 336 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 RPS26P11Q5JNZ5 115 aaPredicted RBP17.02■□□□□ 0.31
PRKCB-202ENST00000321728 GRHL2Q6ISB3 625 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 OTOP2Q7RTS6 562 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 GLRX5Q86SX6 157 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 GOT1L1Q8NHS2 421 aaPredicted RBP17.02■□□□□ 0.31
PRKCB-202ENST00000321728 PHF21AQ96BD5 680 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 PPCDCQ96CD2 204 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 BRD9Q9H8M2 597 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 GULP1Q9UBP9 304 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 DIMT1Q9UNQ2 313 aaKnown RBP17.02■□□□□ 0.31
PRKCB-202ENST00000321728 MGAT4BQ9UQ53 548 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 PCDHGB7Q9Y5F8 929 aa17.02■□□□□ 0.31
PRKCB-202ENST00000321728 PRKYO43930 277 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 SLC43A1O75387 559 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 PSIP1O75475 530 aaKnown RBP17.01■□□□□ 0.31
PRKCB-202ENST00000321728 NR2F6P10588 404 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 HSD3B1P14060 373 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 DDX5P17844 614 aaKnown RBP17.01■□□□□ 0.31
PRKCB-202ENST00000321728 HSD3B2P26439 372 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 RTP2Q5QGT7 225 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 DEF8Q6ZN54 512 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 FAM92BQ6ZTR7 304 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 IQCF2Q8IXL9 164 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 TIGD4Q8IY51 512 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 LRRC20Q8TCA0 184 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 WFDC5Q8TCV5 224 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 DNAJA4Q8WW22 397 aaPredicted RBP17.01■□□□□ 0.31
PRKCB-202ENST00000321728 TM9SF4Q92544 642 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 SAMD11Q96NU1 681 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 MARVELD1Q9BSK0 173 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 WACQ9BTA9 647 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 GLTPQ9NZD2 209 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 KCND3Q9UK17 655 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 SCN8AQ9UQD0 1980 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 BTN3A3O00478 584 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 SLC16A5O15375 505 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 HLA-DQB1P01920 261 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 ARAFP10398 606 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 ACADMP11310 421 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 WNT4P56705 351 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 ZNF763Q0D2J5 394 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 C2orf80Q0P641 193 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 RNLSQ5VYX0 342 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 OR8H3Q8N146 312 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 C9orf62Q8N4C0 152 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 ZFP41Q8N8Y5 198 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 METTL2AQ96IZ6 378 aaKnown RBP17.01■□□□□ 0.31
PRKCB-202ENST00000321728 LRR1Q96L50 414 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 MED18Q9BUE0 208 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 NDOR1Q9UHB4 597 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 CD84Q9UIB8 345 aa17.01■□□□□ 0.31
PRKCB-202ENST00000321728 PLOD3O60568 738 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 FAM157BP0CG42 384 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 ELAVL4P26378 380 aaKnown RBP17■□□□□ 0.31
PRKCB-202ENST00000321728 AVPR1BP47901 424 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 OCLNQ16625 522 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 ZBTB37Q5TC79 503 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 ANKRD54Q6NXT1 300 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 ZNF783Q6ZMS7 281 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 APCDD1Q8J025 514 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 LSMEM1Q8N8F7 131 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 OR4M2Q8NGB6 313 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 DCLRE1CQ96SD1 692 aaKnown RBP17■□□□□ 0.31
PRKCB-202ENST00000321728 TMEM43Q9BTV4 400 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17■□□□□ 0.315e-7■■■■■ 29.2
PRKCB-202ENST00000321728 GPBP1L1Q9HC44 474 aaPredicted RBP17■□□□□ 0.31
PRKCB-202ENST00000321728 ATP6V1HQ9UI12 483 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 C5orf58C9J3I9 102 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 FABP7O15540 132 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 NCR1O76036 304 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 IRS1P35568 1242 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 MBTPS1Q14703 1052 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 UAP1L1Q3KQV9 507 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 FAM180BQ6P0A1 224 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 AGTRAPQ6RW13 159 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 TMEM163Q8TC26 289 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 FOXJ1Q92949 421 aa17■□□□□ 0.31
PRKCB-202ENST00000321728 CDK2AP1O14519 115 aa16.99■□□□□ 0.31
PRKCB-202ENST00000321728 INPPL1O15357 1258 aa16.99■□□□□ 0.31
PRKCB-202ENST00000321728 GPR37L1O60883 481 aa16.99■□□□□ 0.31
PRKCB-202ENST00000321728 POLR2CP19387 275 aaPredicted RBP16.99■□□□□ 0.31
PRKCB-202ENST00000321728 DSTNP60981 165 aa16.99■□□□□ 0.31
PRKCB-202ENST00000321728 RPS26P62854 115 aaKnown RBP16.99■□□□□ 0.31
PRKCB-202ENST00000321728 FABP5Q01469 135 aa16.99■□□□□ 0.31
PRKCB-202ENST00000321728 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
PRKCB-202ENST00000321728 ZNF284Q2VY69 593 aa16.99■□□□□ 0.31
PRKCB-202ENST00000321728 SYT14P1Q58G82 188 aa16.99■□□□□ 0.31
PRKCB-202ENST00000321728 LRRC73Q5JTD7 316 aa16.99■□□□□ 0.31
PRKCB-202ENST00000321728 PLEKHS1Q5SXH7 462 aa16.99■□□□□ 0.31
PRKCB-202ENST00000321728 RETSATQ6NUM9 610 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms